miRNEST 2.0, an integrative microRNA resource :: BLAST
>54555_sly-miR172a:pmrd
Length = 106
Score = 210 bits (106), Expect = 2e-55
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 28 atgtggcataatcaagattcacgtgaaaagttgcaaattggttatataattgatgaaatt 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtggcataatcaagattcacgtgaaaagttgcaaattggttatataattgatgaaatt 60
Query: 88 aatggctggctatttgaaactcacgagaatcttgatgatgctgcat 133
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatggctggctatttgaaactcacgagaatcttgatgatgctgcat 106
>48570_gma-miR172a:pmrd
Length = 159
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaacgact 148
|||||||||||||||||||||||||| ||||||||||
Sbjct: 119 gagaatcttgatgatgctgcatcagccataaacgact 155
>51903_ptc-miRf10081-akr:pmrd
Length = 147
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaacga 146
||||||||||||||||||||||| |||||||||||
Sbjct: 113 gagaatcttgatgatgctgcatcggcaataaacga 147
>48571_gma-miR172b:pmrd
Length = 153
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaacg 145
|||||||||||||||||||||||||| |||||||
Sbjct: 113 gagaatcttgatgatgctgcatcagccataaacg 146
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 acagtcgttgtttgcatatgtggcataatcaagattcac 49
||||||||||||||| |||| |||| ||||||||||||
Sbjct: 4 acagtcgttgtttgcggatgtagcatcatcaagattcac 42
>47531_ath-miRf10431-akr:pmrd
Length = 126
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaacgact 148
||||||||||||||||||||||| ||||| |||||||
Sbjct: 90 gagaatcttgatgatgctgcatcggcaatcaacgact 126
>54466_sbi-miR172d:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||||||||
Sbjct: 72 gagaatcttgatgatgctgcatcagcaa 99
>52946_ptc-miRf11124-akr:pmrd
Length = 138
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaa 143
|||||||||||||||||||||||||| |||||
Sbjct: 103 gagaatcttgatgatgctgcatcagccataaa 134
>51947_ptc-miRf10125-akr:pmrd
Length = 136
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaa 143
|||||||||||||||||||||||||| |||||
Sbjct: 102 gagaatcttgatgatgctgcatcagccataaa 133
>51343_ppd-miR172a:pmrd
Length = 139
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaa 143
||||||||||||||||||||||| ||||||||
Sbjct: 108 gagaatcttgatgatgctgcatcggcaataaa 139
>49516_osa-miRf10301-akr:pmrd
Length = 123
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||||||||
Sbjct: 86 gagaatcttgatgatgctgcatcagcaa 113
>48909_osa-miR172d:pmrd
Length = 130
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||||||||
Sbjct: 90 gagaatcttgatgatgctgcatcagcaa 117
>48133_ath-miRf11033-akr:pmrd
Length = 121
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataaacgac 147
||||||||||||||||||||||| ||||| ||||||
Sbjct: 86 gagaatcttgatgatgctgcatcggcaatcaacgac 121
>51703_ptc-miR172f:pmrd
Length = 161
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataa 142
||||||||||||||||||||||| |||||||
Sbjct: 131 gagaatcttgatgatgctgcatcggcaataa 161
>51700_ptc-miR172c:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataa 142
|||||||||||||||||||||||||| ||||
Sbjct: 98 gagaatcttgatgatgctgcatcagccataa 128
>51699_ptc-miR172b:pmrd
Length = 140
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataa 142
||||||||||||||||||||||| |||||||
Sbjct: 110 gagaatcttgatgatgctgcatcggcaataa 140
>51698_ptc-miR172a:pmrd
Length = 129
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaataa 142
|||||||||||||||||||||||||| ||||
Sbjct: 99 gagaatcttgatgatgctgcatcagccataa 129
>46882_aqc-miR172a:pmrd
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagca 138
|||||||||||||||||||||||||||
Sbjct: 97 gagaatcttgatgatgctgcatcagca 123
>54838_vvi-miR172b:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 112 gagaatcttgatgatgctgcatcagcaata 141
||||||||||||||||||||||| ||||||
Sbjct: 30 gagaatcttgatgatgctgcatcggcaata 1
>54837_vvi-miR172a:pmrd
Length = 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 112 gagaatcttgatgatgctgcatcagcaata 141
||||||||||||||||||||||| ||||||
Sbjct: 30 gagaatcttgatgatgctgcatcggcaata 1
>51344_ppd-miR172b:pmrd
Length = 139
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 112 gagaatcttgatgatgctgcatcagcaata 141
||||||||||||||||||||||| ||||||
Sbjct: 30 gagaatcttgatgatgctgcatcggcaata 1
>47734_ath-miRf10634-akr:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||||||
Sbjct: 37 gaatcttgatgatgctgcatcagcaa 12
>46988_ath-miR172e:pmrd
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||||||
Sbjct: 96 gaatcttgatgatgctgcatcagcaa 121
>54840_vvi-miR172d:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 114 gaatcttgatgatgctgcatcagc 137
||||||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatcagc 5
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 78 gagaatcttgatgatgctgcat 99
>52845_ptc-miRf11023-akr:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||| ||||
Sbjct: 106 gagaatcttgatgatgctgcatcggcaa 133
>48693_mes-miR172:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||||| ||||
Sbjct: 115 gagaatcttgatgatgctgcatcggcaa 142
>48410_bra-miR172b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgcatca 104
>48409_bra-miR172b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgcatca 104
>48408_bra-miR172a:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 86 gagaatcttgatgatgctgcatca 109
>48388_bol-miR172b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgcatca 104
>48387_bol-miR172a:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 86 gagaatcttgatgatgctgcatca 109
>47664_ath-miRf10564-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 74 gagaatcttgatgatgctgcatca 97
>46985_ath-miR172b:pmrd
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 70 gagaatcttgatgatgctgcatca 93
>46984_ath-miR172b:pmrd
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatca 135
||||||||||||||||||||||||
Sbjct: 70 gagaatcttgatgatgctgcatca 93
>54467_sbi-miR172e:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaat 140
||||||||||||||||||| |||||||
Sbjct: 77 gaatcttgatgatgctgcaccagcaat 103
>48906_osa-miR172a:pmrd
Length = 109
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatc 134
|||||||||||||||||||||||
Sbjct: 78 gagaatcttgatgatgctgcatc 100
>46983_ath-miR172a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcatc 134
|||||||||||||||||||||||
Sbjct: 77 gagaatcttgatgatgctgcatc 99
>55043_zma-miR172d:pmrd
Length = 74
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 53 gagaatcttgatgatgctgcat 74
>55042_zma-miR172c:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 102 gagaatcttgatgatgctgcat 123
>55041_zma-miR172b:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 105 gagaatcttgatgatgctgcat 126
>55040_zma-miR172a:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 62 gagaatcttgatgatgctgcat 83
>54839_vvi-miR172c:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaataaa 143
||||||||||||||||||| | ||||||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaataaa 138
>54668_stu-miR172:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 72 gagaatcttgatgatgctgcat 93
>54556_sly-miR172b:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 114 gagaatcttgatgatgctgcat 135
>54465_sbi-miR172c:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 98 gagaatcttgatgatgctgcat 119
>54463_sbi-miR172a:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgcat 133
||||||||||||||||||||||
Sbjct: 81 gagaatcttgatgatgctgcat 102
>53739_ptc-miRf11917-akr:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||| ||||
Sbjct: 109 gaatcttgatgatgctgcatcggcaa 134
>52835_ptc-miRf11013-akr:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||| ||||
Sbjct: 31 gaatcttgatgatgctgcatcggcaa 6
>52315_ptc-miRf10493-akr:pmrd
Length = 141
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||| ||||
Sbjct: 108 gaatcttgatgatgctgcatcggcaa 133
>51948_ptc-miRf10126-akr:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaataaa 143
||||||||||||||||||| | ||||||||
Sbjct: 119 gaatcttgatgatgctgcagcggcaataaa 148
>51901_ptc-miRf10079-akr:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||| ||||
Sbjct: 29 gaatcttgatgatgctgcatcggcaa 4
>51702_ptc-miR172e:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||| ||||
Sbjct: 105 gaatcttgatgatgctgcatcggcaa 130
>51701_ptc-miR172d:pmrd
Length = 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||||| ||||
Sbjct: 154 gaatcttgatgatgctgcatcggcaa 179
>50311_osa-miRf11096-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||| ||||||
Sbjct: 36 gaatcttgatgatgctgcaccagcaa 11
>48908_osa-miR172c:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaa 139
||||||||||||||||||| ||||||
Sbjct: 82 gaatcttgatgatgctgcaccagcaa 107
>51705_ptc-miR172h:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaataa 142
||||||||||||||||||| | |||||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaataa 143
>51704_ptc-miR172g:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatcagcaataa 142
||||||||||||||||||| | |||||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaataa 143
>48907_osa-miR172b:pmrd
Length = 238
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatc 134
|||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcatc 229
>48637_gra-miR172a:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 agaatcttgatgatgctgcat 133
|||||||||||||||||||||
Sbjct: 1 agaatcttgatgatgctgcat 21
>48151_ath-miRf11051-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgca 132
|||||||||||||||||||||
Sbjct: 97 gagaatcttgatgatgctgca 117
>47855_ath-miRf10755-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 112 gagaatcttgatgatgctgca 132
|||||||||||||||||||||
Sbjct: 37 gagaatcttgatgatgctgca 17
>47545_ath-miRf10445-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgca 132
|||||||||||||||||||||
Sbjct: 96 gagaatcttgatgatgctgca 116
>46987_ath-miR172d:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgca 132
|||||||||||||||||||||
Sbjct: 87 gagaatcttgatgatgctgca 107
>46986_ath-miR172c:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 gagaatcttgatgatgctgca 132
|||||||||||||||||||||
Sbjct: 97 gagaatcttgatgatgctgca 117
>46883_aqc-miR172b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcatc 134
|||||||||||||||||||||
Sbjct: 87 gaatcttgatgatgctgcatc 107
>55045_zma-miR172f:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcat 133
||||||||||||||||||||
Sbjct: 116 gaatcttgatgatgctgcat 135
>55044_zma-miR172e:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcat 133
||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155
>54464_sbi-miR172b:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 114 gaatcttgatgatgctgcat 133
||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170
