miRNEST 2.0, an integrative microRNA resource :: BLAST
>54546_sly-miR168:pmrd
Length = 145
Score = 280 bits (141), Expect = 4e-76
Identities = 144/145 (99%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggacctcattcgccggcgccgggaataatgccggacgaacgac 84
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctcattcggcggcgccgggaataatgccggacgaacgac 60
Query: 85 ggcggtgttaattctactaaagctgtcaccgacggatagatgtttgattagcggcgaaat 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcggtgttaattctactaaagctgtcaccgacggatagatgtttgattagcggcgaaat 120
Query: 145 ttgggtcctgccttgcatcaactga 169
|||||||||||||||||||||||||
Sbjct: 121 ttgggtcctgccttgcatcaactga 145
>51651_ptc-miR168b:pmrd
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 18 ctcttattcgcttggtgcaggtcgggacctcattcg 53
|||| |||||||||||||||||||||| || |||||
Sbjct: 4 ctctaattcgcttggtgcaggtcgggaactgattcg 39
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 145 ttgggtcctgccttgcatcaactgaattggaga 177
|||| ||| |||||||||||||||||| |||||
Sbjct: 104 ttggatcccgccttgcatcaactgaatcggaga 136
>51650_ptc-miR168a:pmrd
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 18 ctcttattcgcttggtgcaggtcgggacctcattcg 53
|||| |||||||||||||||||||||| || |||||
Sbjct: 4 ctctgattcgcttggtgcaggtcgggaactgattcg 39
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 145 ttgggtcctgccttgcatcaactgaattggag 176
|||| ||| |||||||||||||||||| ||||
Sbjct: 128 ttggatcccgccttgcatcaactgaatcggag 159
>54802_vvi-miR168:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 ctcttattcgcttggtgcaggtcggga 44
|||| ||||||||||||||||||||||
Sbjct: 4 ctctaattcgcttggtgcaggtcggga 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 154 gccttgcatcaactgaattggagac 178
|||||||||||||||||| ||||||
Sbjct: 105 gccttgcatcaactgaatcggagac 129
>54665_stu-miR168:pmrd
Length = 133
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggacct 47
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacct 23
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 144 tttgggtcctgccttgcatcaactga 169
||||||||| ||||||||||||||||
Sbjct: 108 tttgggtcccgccttgcatcaactga 133
>54388_rco-miR168:pmrd
Length = 156
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 ctcttattcgcttggtgcaggtcggga 44
|||| ||||||||||||||||||||||
Sbjct: 12 ctctaattcgcttggtgcaggtcggga 38
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 145 ttgggtcctgccttgcatcaactgaattggagaccg 180
|||| ||| |||||||||||||||||| | ||||||
Sbjct: 113 ttggatcccgccttgcatcaactgaatcgaagaccg 148
>48560_gma-miR168:pmrd
Length = 125
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 ctcttattcgcttggtgcaggtcggga 44
|||| ||||||||||||||||||||||
Sbjct: 12 ctctaattcgcttggtgcaggtcggga 38
Score = 46.1 bits (23), Expect = 1e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 145 ttgggtcctgccttgcatcaactgaattggagaccgctgtgaa 187
|||| ||| |||||||||||||||||| |||| |||| |||||
Sbjct: 82 ttggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>48349_bna-miR168:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 cggccgcctcttattcgcttggtgcaggtcggga 44
|||| |||||| | ||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcggga 37
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcggga 44
||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcggga 32
>46958_ath-miR168b:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcggga 44
||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38
>46957_ath-miR168a:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcggga 44
||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcggga 37
>54375_pts-miR168b:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggacctcattcg 53
|||||||||||||||||||| || |||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattcg 29
>54374_pts-miR168a:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcggga 44
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54366_ptr-miR168:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcggga 44
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>48649_hte-miR168:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcggga 44
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46959_ath-miR168m:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcggga 44
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
