miRNEST 2.0, an integrative microRNA resource :: BLAST
>47734_ath-miRf10634-akr:pmrd
Length = 138
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tgatgcagcatcatcaagattccca 45
|||||||||||||||||||||||||
Sbjct: 16 tgatgcagcatcatcaagattccca 40
>46988_ath-miR172e:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattccca 45
|||||||||||||||||||||||||
Sbjct: 117 tgatgcagcatcatcaagattccca 93
>54840_vvi-miR172d:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 gttagatgatgcagcatcatcaagattc 42
||||| ||||||||||||||||||||||
Sbjct: 1 gttagctgatgcagcatcatcaagattc 28
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 129 tgtgaatcttgatgatgttgcatc 152
||||||||||||||||| ||||||
Sbjct: 31 tgtgaatcttgatgatgctgcatc 8
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 99 atgcagcatcatcaagattc 80
>53739_ptc-miRf11917-akr:pmrd
Length = 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 129 gatgcagcatcatcaagattccca 106
>52835_ptc-miRf11013-akr:pmrd
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 11 gatgcagcatcatcaagattccca 34
>52315_ptc-miRf10493-akr:pmrd
Length = 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 128 gatgcagcatcatcaagattccca 105
>51901_ptc-miRf10079-akr:pmrd
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 9 gatgcagcatcatcaagattccca 32
>51702_ptc-miR172e:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 125 gatgcagcatcatcaagattccca 102
>51701_ptc-miR172d:pmrd
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 174 gatgcagcatcatcaagattccca 151
>48907_osa-miR172b:pmrd
Length = 238
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 229 gatgcagcatcatcaagattccca 206
>46883_aqc-miR172b:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 107 gatgcagcatcatcaagattccca 84
>55045_zma-miR172f:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattccca 45
|||||||||||||||||||||||
Sbjct: 135 atgcagcatcatcaagattccca 113
>55044_zma-miR172e:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattccca 45
|||||||||||||||||||||||
Sbjct: 155 atgcagcatcatcaagattccca 133
>54464_sbi-miR172b:pmrd
Length = 170
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattccca 45
|||||||||||||||||||||||
Sbjct: 170 atgcagcatcatcaagattccca 148
>53842_ptc-miRf12020-akr:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 129 tgcagcatcatcaagattcccaa 107
>52375_ptc-miRf10553-akr:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 129 tgcagcatcatcaagattcccaa 107
>51948_ptc-miRf10126-akr:pmrd
Length = 152
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 137 tgcagcatcatcaagattcccaa 115
>51705_ptc-miR172h:pmrd
Length = 143
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccaa 111
>51704_ptc-miR172g:pmrd
Length = 143
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccaa 111
>54839_vvi-miR172c:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 127 tgcagcatcatcaagattccca 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 128 ttgtgaatcttgatgatgttgcatcctcaaac 159
|||||||||||||||||| | ||||| |||||
Sbjct: 32 ttgtgaatcttgatgatgctccatccgcaaac 1
>54466_sbi-miR172d:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 95 tgatgcagcatcatcaagattc 74
>52946_ptc-miRf11124-akr:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 126 tgatgcagcatcatcaagattc 105
>51947_ptc-miRf10125-akr:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 125 tgatgcagcatcatcaagattc 104
>51700_ptc-miR172c:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 121 tgatgcagcatcatcaagattc 100
>51698_ptc-miR172a:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 122 tgatgcagcatcatcaagattc 101
>49516_osa-miRf10301-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88
>48909_osa-miR172d:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 113 tgatgcagcatcatcaagattc 92
>48571_gma-miR172b:pmrd
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 136 tgatgcagcatcatcaagattc 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 129 tgtgaatcttgatgatgttgcatcctcaaaca 160
||||||||||||||||| | ||||| ||||||
Sbjct: 43 tgtgaatcttgatgatgctacatccgcaaaca 12
>48570_gma-miR172a:pmrd
Length = 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 142 tgatgcagcatcatcaagattc 121
>48410_bra-miR172b:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83
>48409_bra-miR172b:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83
>48408_bra-miR172a:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88
>48388_bol-miR172b:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83
>48387_bol-miR172a:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88
>47664_ath-miRf10564-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 97 tgatgcagcatcatcaagattc 76
>46985_ath-miR172b:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 93 tgatgcagcatcatcaagattc 72
>46984_ath-miR172b:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 93 tgatgcagcatcatcaagattc 72
>46882_aqc-miR172a:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 120 tgatgcagcatcatcaagattc 99
>54838_vvi-miR172b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattc 28
>54837_vvi-miR172a:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattc 28
>52845_ptc-miRf11023-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 128 gatgcagcatcatcaagattc 108
>51903_ptc-miRf10081-akr:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 135 gatgcagcatcatcaagattc 115
>51703_ptc-miR172f:pmrd
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 153 gatgcagcatcatcaagattc 133
>51699_ptc-miR172b:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 132 gatgcagcatcatcaagattc 112
>51344_ppd-miR172b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattc 28
>51343_ppd-miR172a:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 130 gatgcagcatcatcaagattc 110
>48906_osa-miR172a:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 100 gatgcagcatcatcaagattc 80
>48693_mes-miR172:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 137 gatgcagcatcatcaagattc 117
>48133_ath-miRf11033-akr:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 108 gatgcagcatcatcaagattc 88
>47531_ath-miRf10431-akr:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 112 gatgcagcatcatcaagattc 92
>46983_ath-miR172a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 99 gatgcagcatcatcaagattc 79
>55043_zma-miR172d:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 74 atgcagcatcatcaagattc 55
>55042_zma-miR172c:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 123 atgcagcatcatcaagattc 104
>55041_zma-miR172b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 126 atgcagcatcatcaagattc 107
>55040_zma-miR172a:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 83 atgcagcatcatcaagattc 64
>54668_stu-miR172:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 93 atgcagcatcatcaagattc 74
>54556_sly-miR172b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 135 atgcagcatcatcaagattc 116
>54555_sly-miR172a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 106 atgcagcatcatcaagattc 87
>54465_sbi-miR172c:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 119 atgcagcatcatcaagattc 100
>54463_sbi-miR172a:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 102 atgcagcatcatcaagattc 83
>48637_gra-miR172a:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 21 atgcagcatcatcaagattc 2
>46987_ath-miR172d:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaaa 47
||||||||||||||||||| ||||
Sbjct: 107 tgcagcatcatcaagattctcaaa 84
