miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>50185_osa-miRf10970-akr:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 aggctcgggctcggctcgttt 32
          |||||||||||||||||||||
Sbjct: 83 aggctcgggctcggctcgttt 63

>50184_osa-miRf10969-akr:pmrd
          Length = 143

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 aggctcgggctcggctcgttt 32
          |||||||||||||||||||||
Sbjct: 88 aggctcgggctcggctcgttt 68

>49987_osa-miRf10772-akr:pmrd
          Length = 143

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 aggctcgggctcggctcgttt 32
          |||||||||||||||||||||
Sbjct: 88 aggctcgggctcggctcgttt 68

>49664_osa-miRf10449-akr:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 aggctcgggctcggctcgttt 32
          |||||||||||||||||||||
Sbjct: 77 aggctcgggctcggctcgttt 57

>50622_osa-miRf11407-akr:pmrd
          Length = 131

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 13 ggctcgggctcggctcgtttaataaacgagct 44
          ||||||||||||||||| || | |||||||||
Sbjct: 12 ggctcgggctcggctcggttcacaaacgagct 43