miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54470_sbi-miR393:pmrd
          Length = 139

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 29 ggaagcttccaaagggatcgcattgatccg 58
          |||||| |||||||||||||||||||||||
Sbjct: 14 ggaagcatccaaagggatcgcattgatccg 43




>48917_osa-miR393:pmrd
          Length = 115

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 29 ggaagcttccaaagggatcgcattgatcc 57
          |||||| ||||||||||||||||||||||
Sbjct: 4  ggaagcatccaaagggatcgcattgatcc 32




>54849_vvi-miR393a:pmrd
          Length = 126

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 35 ttccaaagggatcgcattgatcc 57
          |||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatcc 32




>55062_zma-miR393f:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatcc 22




>55057_zma-miR393a:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatcc 22




>54850_vvi-miR393b:pmrd
          Length = 83

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>53841_ptc-miRf12019-akr:pmrd
          Length = 98

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatcc 38




>53840_ptc-miRf12018-akr:pmrd
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35




>52949_ptc-miRf11127-akr:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35




>52948_ptc-miRf11126-akr:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35




>52374_ptc-miRf10552-akr:pmrd
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35




>51972_ptc-miRf10150-akr:pmrd
          Length = 98

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 82 tccaaagggatcgcattgatcc 61




>51950_ptc-miRf10128-akr:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatcc 38




>51723_ptc-miR393d:pmrd
          Length = 107

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 35 ttccaaagggatcgcattgatc 56
          ||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatc 31




>51722_ptc-miR393c:pmrd
          Length = 107

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 35 ttccaaagggatcgcattgatc 56
          ||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatc 31




>51721_ptc-miR393b:pmrd
          Length = 84

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>51720_ptc-miR393a:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>48731_mtr-miR393b:pmrd
          Length = 119

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 6  tccaaagggatcgcattgatcc 27




>48730_mtr-miR393:pmrd
          Length = 135

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcc 42




>48576_gma-miR393:pmrd
          Length = 120

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>48373_bna-miR393:pmrd
          Length = 127

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatcc 22




>47287_ath-miRf10187-akr:pmrd
          Length = 162

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 12 tccaaagggatcgcattgatcc 33




>47214_ath-miRf10114-akr:pmrd
          Length = 131

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 10 tccaaagggatcgcattgatcc 31




>46999_ath-miR393b:pmrd
          Length = 160

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>46998_ath-miR393a:pmrd
          Length = 133

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 tccaaagggatcgcattgatcc 57
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>55063_zma-miR393g:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatc 21




>55061_zma-miR393e:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 87 tccaaagggatcgcattgatc 67




>55060_zma-miR393d:pmrd
          Length = 91

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 89 tccaaagggatcgcattgatc 69




>55059_zma-miR393c:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 3  tccaaagggatcgcattgatc 23




>55058_zma-miR393b:pmrd
          Length = 91

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 3  tccaaagggatcgcattgatc 23




>55056_zma-miR393:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41




>48919_osa-miR393b:pmrd
          Length = 132

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47




>48918_osa-miR393b:pmrd
          Length = 132

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47




>48501_ghr-miR393:pmrd
          Length = 119

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tccaaagggatcgcattgatc 56
          |||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatc 21