miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46913_ath-miR156d:pmrd
          Length = 118

 Score =  125 bits (63), Expect = 7e-30
 Identities = 100/111 (90%), Gaps = 6/111 (5%)
 Strand = Plus / Plus

                                                                       
Query: 3   aaaagaagttgacagaagagagtgagcacacaaagggggaattgtataaaattaagtttg 62
           |||||||||||||||||||||||||||||||||||||| | ||||||||    |||||  
Sbjct: 9   aaaagaagttgacagaagagagtgagcacacaaaggggaagttgtataa----aagtt-- 62

                                                              
Query: 63  ttgtatatagttgcttttgcgtgctcactctctctatgtcataacttctcc 113
           |||||||| |||||||||||||||||||||||| | |||||||||||||||
Sbjct: 63  ttgtatatggttgcttttgcgtgctcactctctttttgtcataacttctcc 113




>47667_ath-miRf10567-akr:pmrd
          Length = 98

 Score =  111 bits (56), Expect = 1e-25
 Identities = 93/104 (89%), Gaps = 6/104 (5%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaagttgacagaagagagtgagcacacaaagggggaattgtataaaattaagtttgttgt 66
           |||||||||||||||||||||||||||||||||| | ||||||||    |||||  ||||
Sbjct: 1   gaagttgacagaagagagtgagcacacaaaggggaagttgtataa----aagtt--ttgt 54

                                                       
Query: 67  atatagttgcttttgcgtgctcactctctctatgtcataacttc 110
           |||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 55  atatggttgcttttgcgtgctcactctctttttgtcataacttc 98




>51595_ptc-miR156e:pmrd
          Length = 100

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                             
Query: 6  agaagttgacagaagagagtgagcacacaaagggggaattgtataaaatta 56
          |||| |||||||||||||||||||||||| |||   | |||||||||||||
Sbjct: 5  agaaattgacagaagagagtgagcacacagaggcatatttgtataaaatta 55




>46912_ath-miR156c:pmrd
          Length = 104

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacagaagagagtgagcacacaaagg 38
          |||||||||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcacacaaagg 38




>46910_ath-miR156a:pmrd
          Length = 123

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacagaagagagtgagcacacaaagg 38
          |||||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacaaagg 47




>52469_ptc-miRf10647-akr:pmrd
          Length = 104

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 9  agttgacagaagagagtgagcacaca 34
          ||||||||||||||||||||||||||
Sbjct: 96 agttgacagaagagagtgagcacaca 71




>51594_ptc-miR156d:pmrd
          Length = 101

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  agttgacagaagagagtgagcacaca 34
          ||||||||||||||||||||||||||
Sbjct: 8  agttgacagaagagagtgagcacaca 33




>48806_osa-miR156f:pmrd
          Length = 186

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  agttgacagaagagagtgagcacaca 34
          ||||||||||||||||||||||||||
Sbjct: 1  agttgacagaagagagtgagcacaca 26




>48336_bna-miR156a:pmrd
          Length = 82

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tgacagaagagagtgagcacacaaa 36
          |||||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacacaaa 25




>54912_zma-miR156b:pmrd
          Length = 124

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 ttgacagaagagagtgagcacaca 34
          ||||||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcacaca 43




>48810_osa-miR156j:pmrd
          Length = 165

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 gttgacagaagagagtgagcacac 33
          ||||||||||||||||||||||||
Sbjct: 40 gttgacagaagagagtgagcacac 63




>48808_osa-miR156h:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 gttgacagaagagagtgagcacac 33
          ||||||||||||||||||||||||
Sbjct: 7  gttgacagaagagagtgagcacac 30




>54924_zma-miR156o:pmrd
          Length = 99

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23




>54922_zma-miR156m:pmrd
          Length = 83

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23




>54914_zma-miR156d:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 ttgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 15 ttgacagaagagagtgagcacac 37




>54913_zma-miR156c:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacaca 43




>54911_zma-miR156a:pmrd
          Length = 152

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacaca 40




>54768_vvi-miR156c:pmrd
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33




>54767_vvi-miR156b:pmrd
          Length = 102

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33




>54402_sbi-miR157:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 ttgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagtgagcacac 23




>54401_sbi-miR156i:pmrd
          Length = 121

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25




>54395_sbi-miR156c:pmrd
          Length = 95

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23




>54394_sbi-miR156b:pmrd
          Length = 84

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23




>53789_ptc-miRf11967-akr:pmrd
          Length = 87

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25




>51926_ptc-miRf10104-akr:pmrd
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 8  tgacagaagagagtgagcacaca 30




>51596_ptc-miR156f:pmrd
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33




>51593_ptc-miR156c:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33




>51592_ptc-miR156b:pmrd
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33




>51591_ptc-miR156a:pmrd
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33




>51354_ppr-miR156:pmrd
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacaca 24




>49442_osa-miRf10227-akr:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 89 tgacagaagagagtgagcacaca 67




>48807_osa-miR156g:pmrd
          Length = 116

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcacaca 26




>48804_osa-miR156d:pmrd
          Length = 129

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 ttgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 19 ttgacagaagagagtgagcacac 41




>48803_osa-miR156c:pmrd
          Length = 149

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcacaca 51




>48802_osa-miR156b:pmrd
          Length = 176

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 43 tgacagaagagagtgagcacaca 65




>48795_oru-miR156:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacaca 24




>48652_hvv-miR156a:pmrd
          Length = 394

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23




>48491_ghr-miR156d:pmrd
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 ttgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 8  ttgacagaagagagtgagcacac 30




>48489_ghr-miR156b:pmrd
          Length = 113

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25




>48488_ghr-miR156a:pmrd
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 9  tgacagaagagagtgagcacaca 31




>48248_ath-miRf11148-akr:pmrd
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcacaca 74




>47357_ath-miRf10257-akr:pmrd
          Length = 94

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25




>47356_ath-miRf10256-akr:pmrd
          Length = 94

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25




>46915_ath-miR156f:pmrd
          Length = 132

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacaca 43




>46914_ath-miR156e:pmrd
          Length = 107

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcacaca 29




>54923_zma-miR156n:pmrd
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>54919_zma-miR156i:pmrd
          Length = 117

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacac 34




>54918_zma-miR156h:pmrd
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacac 41




>54915_zma-miR156e:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacac 41




>54758_tre-miR156:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagtgagcaca 22




>54656_stu-miR156a:pmrd
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>54400_sbi-miR156h:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacac 23




>54399_sbi-miR156g:pmrd
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacac 23




>54393_sbi-miR156a:pmrd
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>49326_osa-miRf10111-akr:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcacac 28




>48813_osa-miR156m:pmrd
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>48809_osa-miR156i:pmrd
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacac 24




>48805_osa-miR156e:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacac 31




>48801_osa-miR156a:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcacac 28




>48425_cpt-miR156a:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32




>46916_ath-miR156g:pmrd
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 gacagaagagagtgagcacaca 34
          ||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacaca 33