miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54714_tae-miR1139:pmrd
Length = 216
Score = 97.6 bits (49), Expect = 4e-21
Identities = 97/111 (87%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 22 gccacagtgcatagtaacatacactagtaacatatacatatccctag-actatgttacta 80
||||||||| | |||||||||||||||||||||| |||||||||||| ||||| | ||||
Sbjct: 1 gccacagtggagagtaacatacactagtaacatacacatatccctagaactatataacta 60
Query: 81 tcttcatagtgggtagtaaaataagtatggtaatatgcaaagcttcattta 131
|||||||| ||||| || |||||| ||||| |||||||||||||||||
Sbjct: 61 ccttcatag-kggtagcaacataagtgtggtatcatgcaaagcttcattta 110
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 195 ctcgatgttactgctgaagttactcccact 224
|||||||||||| ||||||||||||||||
Sbjct: 187 ctcgatgttactattgaagttactcccact 216
>48323_bdi-miR1139:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 agtaacatacactagtaacat 54
|||||||||||||||||||||
Sbjct: 63 agtaacatacactagtaacat 83
