miRNEST 2.0, an integrative microRNA resource :: BLAST
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 3 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 45
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 68
>46938_ath-miR162b:pmrd
Length = 111
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 45
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa 46
>54387_rco-miR162:pmrd
Length = 96
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 76 gcatgaatcgatcgataaacctctgcatccag 107
||||||||||||||||||||||||||||||||
Sbjct: 64 gcatgaatcgatcgataaacctctgcatccag 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 3 ctggaggcagcggttcatcgatc 25
>46937_ath-miR162a:pmrd
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 agtcgctggaggcagcggttcatcgatcaattcctgtgaa 45
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctgtgaa 59
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 74 aagcatgaatcgatcgataaacctctgcatccag 107
|||||||||| |||||||||||||||||||||||
Sbjct: 76 aagcatgaatagatcgataaacctctgcatccag 109
>48682_llu-miR162:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>48545_gma-miR162a:pmrd
Length = 102
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatc 33
||||||| ||||| |||||||||||||||||
Sbjct: 2 tgaagtcactggatgcagcggttcatcgatc 32
>48493_ghr-miR162a:pmrd
Length = 148
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccag 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatc 46
>48423_cpa-miR162a:pmrd
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||||
Sbjct: 70 catgaatcgatcgataaacctctgcatccag 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 aagtcgctggaggcagcggttcatcgatc 33
||||| |||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatc 35
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccagtgcttc 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 94 ctggaggcagcggttcatcgatc 72
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccagtgcttc 3
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 96 ctggaggcagcggttcatcgatc 74
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccagtgcttc 3
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 96 ctggaggcagcggttcatcgatc 74
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccagtgcttc 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 94 ctggaggcagcggttcatcgatc 72
>51618_ptc-miR162c:pmrd
Length = 107
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagtgcttc 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>51617_ptc-miR162b:pmrd
Length = 107
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccagtgcttc 113
||||||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagtgcttc 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 77 catgaatcgatcgataaacctctgcatccagtgcttc 113
|||||| |||||||||||||||||||||||| |||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccagcgcttc 2
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatc 73
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 77 catgaatcgatcgataaacctctgcatccagtgcttc 113
|||||| |||||||||||||||||||||||| |||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccagcgcttc 2
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatc 73
>51616_ptc-miR162a:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccagtgcttc 113
|||||| |||||||||||||||||||||||| |||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccagcgcttc 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>48834_osa-miR162a:pmrd
Length = 171
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccagt 108
|||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccagt 164
>48707_mtr-miR162d:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
||||||||| |||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 77 catgaatcgatcgataaacctctgcatcca 106
||||||||| ||||||||||||||||||||
Sbjct: 30 catgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatcca 106
||||||||| ||||||||||||||||||||
Sbjct: 56 catgaatcggtcgataaacctctgcatcca 85
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54784_vvi-miR162:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tgaagtcgctggaggcagcggttcatcgatc 33
||||||| ||||| |||||||||||||||||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatc 31
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>48836_osa-miR162m:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcgatcgataaacctctgcatccag 107
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>48690_mdo-miR162:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 catgaatcgatcgataaacctctgcatccag 107
||||||||| ||||||||||| |||||||||
Sbjct: 58 catgaatcggtcgataaacctttgcatccag 88
>48685_lsa-miR162:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
>48546_gma-miR162m:pmrd
Length = 367
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
