miRNEST 2.0, an integrative microRNA resource :: BLAST
>46937_ath-miR162a:pmrd
Length = 140
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 76 aaagcatgaacagatcgataaacctctgcatccagcg 112
|||||||||| ||||||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 gctggaggcagcggttgatcgatctctt 48
|||||||||||||||| |||||||||||
Sbjct: 24 gctggaggcagcggttcatcgatctctt 51
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 80 catgaacagatcgataaacctctgcatccagcg 112
||||||| |||||||||||||||||||||||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccagcg 6
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 ctggaggcagcggttgatcgatctctt 48
||||||||||||||| |||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatctctt 69
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 80 catgaacagatcgataaacctctgcatccagcg 112
||||||| |||||||||||||||||||||||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccagcg 6
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 ctggaggcagcggttgatcgatctctt 48
||||||||||||||| |||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatctctt 69
>51616_ptc-miR162a:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 80 catgaacagatcgataaacctctgcatccagcg 112
||||||| |||||||||||||||||||||||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccagcg 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 ctggaggcagcggttgatcgatctctt 48
||||||||||||||| |||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctctt 37
>54387_rco-miR162:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 79 gcatgaacagatcgataaacctctgcatccagc 111
||||||| ||||||||||||||||||||||||
Sbjct: 64 gcatgaatcgatcgataaacctctgcatccagc 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 ctggaggcagcggttgatcgatctctt 48
||||||||||||||| |||||||||||
Sbjct: 3 ctggaggcagcggttcatcgatctctt 29
>48545_gma-miR162a:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccagcg 112
|||||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccagcg 95
>48493_ghr-miR162a:pmrd
Length = 148
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccagcg 112
|||||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatccagcg 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 ctggaggcagcggttgatcgatctctt 48
||||||||||||||| |||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctctt 50
>48423_cpa-miR162a:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccagcg 112
|||||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatccagcg 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 ctggaggcagcggttgatcgatctctt 48
||||||||||||||| |||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatctctt 39
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 88 gatcgataaacctctgcatccagcg 112
|||||||||||||||||||||||||
Sbjct: 37 gatcgataaacctctgcatccagcg 13
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 gctggaggcagcggttgatcgatc 44
|||||||||||||||| |||||||
Sbjct: 103 gctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccagcg 112
|||||||||||||||||||||||||
Sbjct: 77 gatcgataaacctctgcatccagcg 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gctggaggcagcggttgatcgatc 44
|||||||||||||||| |||||||
Sbjct: 11 gctggaggcagcggttcatcgatc 34
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 34 gaaccgatcgataaacctctgcatccag 7
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 ctggaggcagcggttgatcgatct 45
||||||||||||||| ||||||||
Sbjct: 94 ctggaggcagcggttcatcgatct 71
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 36 gaaccgatcgataaacctctgcatccag 9
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 ctggaggcagcggttgatcgatct 45
||||||||||||||| ||||||||
Sbjct: 96 ctggaggcagcggttcatcgatct 73
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 36 gaaccgatcgataaacctctgcatccag 9
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 ctggaggcagcggttgatcgatct 45
||||||||||||||| ||||||||
Sbjct: 96 ctggaggcagcggttcatcgatct 73
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 34 gaaccgatcgataaacctctgcatccag 7
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 ctggaggcagcggttgatcgatct 45
||||||||||||||| ||||||||
Sbjct: 94 ctggaggcagcggttcatcgatct 71
>51618_ptc-miR162c:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 ctggaggcagcggttgatcgatct 45
||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatct 34
>51617_ptc-miR162b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 ctggaggcagcggttgatcgatct 45
||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatct 34
>48682_llu-miR162:pmrd
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 75 caaagcatgaacagatcgataaacctctgcatccag 110
|||| |||||| |||||||||||||||||||||||
Sbjct: 45 caaaccatgaatcgatcgataaacctctgcatccag 80
>54784_vvi-miR162:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccagcg 112
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>48834_osa-miR162a:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 gatcgataaacctctgcatccag 110
|||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163
>48685_lsa-miR162:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccagcg 112
|||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcg 23
>48546_gma-miR162m:pmrd
Length = 367
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccagcg 112
|||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcg 23
>54948_zma-miR162b:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>48707_mtr-miR162d:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatccag 110
|||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccag 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||||||||||| |||| ||||||||||
Sbjct: 28 gaacagatcgatgaaccgctgcatccag 1
>48706_mtr-miR162c:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 tcgataaacctctgcatcca 109
||||||||||||||||||||
Sbjct: 20 tcgataaacctctgcatcca 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 83 gaacagatcgataaacctctgcatccag 110
|||||||||||| |||| ||||||||||
Sbjct: 59 gaacagatcgatgaaccgctgcatccag 86
>48705_mtr-miR162b:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tcgataaacctctgcatcca 109
||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85
