miRNEST 2.0, an integrative microRNA resource :: BLAST
>48499_ghr-miR390b:pmrd
Length = 132
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 10 gaagaatctgttaagctcaggagggatagcgccatgg 46
|||||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgttaagctcaggagggatagcgccatgg 42
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttca 94
||||||||||||||||||||||
Sbjct: 94 gcgctatccatcctgagtttca 115
>48498_ghr-miR390a:pmrd
Length = 124
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 10 gaagaatctgttaagctcaggagggatagcgccatgg 46
|||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaagaatctgttaagctcaggagggatagcgccatgg 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttca 94
||||||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagtttca 112
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 5 gtagagaagaatctgttaagctcaggagggatagcgccatg 45
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtagagaagaatctgtaaagctcaggagggatagcgccatg 41
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgcttcttcttact 109
|||||||||||||||||||||| || ||||||||||
Sbjct: 69 gcgctatccatcctgagtttcattggctcttcttact 105
>46995_ath-miR390a:pmrd
Length = 107
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 5 gtagagaagaatctgttaagctcaggagggatagcgccatg 45
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtagagaagaatctgtaaagctcaggagggatagcgccatg 41
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgcttcttcttact 109
|||||||||||||||||||||| || ||||||||||
Sbjct: 69 gcgctatccatcctgagtttcattggctcttcttact 105
>48371_bna-miR390b:pmrd
Length = 105
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 5 gtagagaagaatctgttaagctcaggagggatagcgccat 44
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtagagaagaatctgtaaagctcaggagggatagcgccat 40
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgcttcttcttact 109
||||| |||||||||||||||| || ||||||||||
Sbjct: 67 gcgctgtccatcctgagtttcattggctcttcttact 103
>48500_ghr-miR390c:pmrd
Length = 114
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagcgccatgg 46
|||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatgg 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttca 94
||||||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtttca 108
>54848_vvi-miR390:pmrd
Length = 140
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagcgccatg 45
||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgcttcttc 104
|||||||| |||||||||||||| | ||||||
Sbjct: 109 gcgctatctatcctgagtttcacgggttcttc 140
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagcgccatg 45
||||||||||||||||||||||||||||||||||
Sbjct: 4 agaatctgttaagctcaggagggatagcgccatg 37
>51716_ptc-miR390a:pmrd
Length = 119
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagcgccatg 45
||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>51719_ptc-miR390d:pmrd
Length = 106
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagcgcc 42
|||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactg 97
|||||||||||||||||||| ||||
Sbjct: 79 gcgctatccatcctgagttttactg 103
>51718_ptc-miR390c:pmrd
Length = 123
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 atctgttaagctcaggagggatagcgccatg 45
|||||||||||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatg 34
>51717_ptc-miR390b:pmrd
Length = 106
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagcgcc 42
|||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgctt 100
|||||||||||||||||||||| |||||
Sbjct: 79 gcgctatccatcctgagtttcattgctt 106
>48372_bna-miR390c:pmrd
Length = 128
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 4 agtagagaagaatctgttaagctcaggagggatagcgccatg 45
|||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 5 agtagagaagtagctgtaaagctcaggagggatagcgccatg 46
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgcttcttctt 106
||||||||||||||||||| || ||||||||||
Sbjct: 85 gcgctatccatcctgagttccatggcttcttctt 118
>48370_bna-miR390a:pmrd
Length = 144
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 8 gagaagaatctgttaagctcaggagggatagcgccatg 45
|||||| | |||| ||||||||||||||||||||||||
Sbjct: 19 gagaagtagctgtaaagctcaggagggatagcgccatg 56
>46996_ath-miR390b:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgccatggc 47
||||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatggc 40
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagtttcactgcttcttctt 106
||||||||||||||||||| || ||||||||||
Sbjct: 87 gcgctatccatcctgagttccatagcttcttctt 120
>48729_mtr-miR390:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 60 ttgatcttcatttgcgctatccatcctgagttt 92
||||||||| ||||||||||||||||||||||
Sbjct: 58 ttgatcttctcttgcgctatccatcctgagttt 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgccat 44
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
>53138_ptc-miRf11316-akr:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 gttaagctcaggagggatagcgcc 42
||||||||||||||||||||||||
Sbjct: 1 gttaagctcaggagggatagcgcc 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagttt 92
||||||||||||||||||||
Sbjct: 72 gcgctatccatcctgagttt 91
>48575_gma-miR390b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 agaatctgttaagctcaggagggatagc 39
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgccatg 45
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 gcgctatccatcctgagttt 92
||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71
>51391_ppt-miR390a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgccat 44
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>55055_zma-miR390:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgcc 42
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>51392_ppt-miR390b:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgcc 42
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>48916_osa-miR390:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 aagctcaggagggatagcgcc 42
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>51394_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 agctcaggagggatagcgcc 42
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>51393_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 agctcaggagggatagcgcc 42
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
