miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48834_osa-miR162a:pmrd
          Length = 171

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 87  ggaatcgatcgataaacctctgcatccagt 116
           ||||||||||||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccagt 164




>54387_rco-miR162:pmrd
          Length = 96

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 68  gaatcgatcgataaacctctgcatccag 95




>48682_llu-miR162:pmrd
          Length = 80

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 53  gaatcgatcgataaacctctgcatccag 80




>48545_gma-miR162a:pmrd
          Length = 102

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 66  gaatcgatcgataaacctctgcatccag 93




>48493_ghr-miR162a:pmrd
          Length = 148

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 87  gaatcgatcgataaacctctgcatccag 114




>48423_cpa-miR162a:pmrd
          Length = 109

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 73  gaatcgatcgataaacctctgcatccag 100




>47354_ath-miRf10254-akr:pmrd
          Length = 115

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 42  gaatcgatcgataaacctctgcatccag 15



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 23  tggagtcagcggttcatcgatcagttcct 51
           ||||| ||||||||||||||||| |||||
Sbjct: 101 tggaggcagcggttcatcgatcaattcct 73




>46938_ath-miR162b:pmrd
          Length = 111

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 72  gaatcgatcgataaacctctgcatccag 99



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 23 tggagtcagcggttcatcgatcagttcct 51
          ||||| ||||||||||||||||| |||||
Sbjct: 13 tggaggcagcggttcatcgatcaattcct 41




>54542_sly-miR162:pmrd
          Length = 99

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 86  aggaatcgatcgataaacctctgcatccag 115
           |||||||| |||||||||||||||||||||
Sbjct: 70  aggaatcggtcgataaacctctgcatccag 99




>52498_ptc-miRf10676-akr:pmrd
          Length = 101

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 92  cgatcgataaacctctgcatccagtg 117
           ||||||||||||||||||||||||||
Sbjct: 30  cgatcgataaacctctgcatccagtg 5




>52497_ptc-miRf10675-akr:pmrd
          Length = 105

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 92  cgatcgataaacctctgcatccagtg 117
           ||||||||||||||||||||||||||
Sbjct: 32  cgatcgataaacctctgcatccagtg 7




>52244_ptc-miRf10422-akr:pmrd
          Length = 105

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 92  cgatcgataaacctctgcatccagtg 117
           ||||||||||||||||||||||||||
Sbjct: 32  cgatcgataaacctctgcatccagtg 7




>52243_ptc-miRf10421-akr:pmrd
          Length = 101

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 92  cgatcgataaacctctgcatccagtg 117
           ||||||||||||||||||||||||||
Sbjct: 30  cgatcgataaacctctgcatccagtg 5




>51618_ptc-miR162c:pmrd
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 92  cgatcgataaacctctgcatccagtg 117
           ||||||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatccagtg 100




>51617_ptc-miR162b:pmrd
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 92  cgatcgataaacctctgcatccagtg 117
           ||||||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatccagtg 100




>48836_osa-miR162m:pmrd
          Length = 114

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 86  aggaatcgatcgataaacctctgcatccag 115
           |||||||||||||||| |||||||||||||
Sbjct: 85  aggaatcgatcgataagcctctgcatccag 114




>48835_osa-miR162b:pmrd
          Length = 134

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 86  aggaatcgatcgataaacctctgcatccag 115
           |||||||||||||||| |||||||||||||
Sbjct: 95  aggaatcgatcgataagcctctgcatccag 124




>54948_zma-miR162b:pmrd
          Length = 130

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 87  ggaatcgatcgataaacctctgcatccag 115
           ||||||| |||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130




>54784_vvi-miR162:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           |||||| |||||||||||||||||||||
Sbjct: 66  gaatcggtcgataaacctctgcatccag 93




>52400_ptc-miRf10578-akr:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 92  cgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||
Sbjct: 31  cgatcgataaacctctgcatccag 8




>52399_ptc-miRf10577-akr:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 92  cgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||
Sbjct: 31  cgatcgataaacctctgcatccag 8




>51616_ptc-miR162a:pmrd
          Length = 107

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  cgatcgataaacctctgcatccag 115
           ||||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatccag 98




>48707_mtr-miR162d:pmrd
          Length = 87

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           |||||| |||||||||||||||||||||
Sbjct: 60  gaatcggtcgataaacctctgcatccag 87




>46937_ath-miR162a:pmrd
          Length = 140

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           |||| |||||||||||||||||||||||
Sbjct: 82  gaatagatcgataaacctctgcatccag 109




>48706_mtr-miR162c:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 88  gaatcgatcgataaacctctgcatcca 114
           |||||| ||||||||||||||||||||
Sbjct: 27  gaatcggtcgataaacctctgcatcca 1




>48705_mtr-miR162b:pmrd
          Length = 85

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 88  gaatcgatcgataaacctctgcatcca 114
           |||||| ||||||||||||||||||||
Sbjct: 59  gaatcggtcgataaacctctgcatcca 85




>48685_lsa-miR162:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  tcgataaacctctgcatccag 115
           |||||||||||||||||||||
Sbjct: 1   tcgataaacctctgcatccag 21




>48546_gma-miR162m:pmrd
          Length = 367

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  tcgataaacctctgcatccag 115
           |||||||||||||||||||||
Sbjct: 1   tcgataaacctctgcatccag 21




>48690_mdo-miR162:pmrd
          Length = 88

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcgatcgataaacctctgcatccag 115
           |||||| ||||||||||| |||||||||
Sbjct: 61  gaatcggtcgataaacctttgcatccag 88