miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46960_ath-miR169a:pmrd
          Length = 226

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 12 gaaagtagtgtgcagccaaggatgacttgccga 44
          |||||||||||||||||||||||||||||||||
Sbjct: 6  gaaagtagtgtgcagccaaggatgacttgccga 38




>48351_bna-miR169b:pmrd
          Length = 188

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 13 aaagtagtgtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||||||||||
Sbjct: 7  aaagtagtgtgcagccaaggatgacttgccga 38




>48350_bna-miR169a:pmrd
          Length = 132

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 13 aaagtagtgtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||||||||||
Sbjct: 8  aaagtagtgtgcagccaaggatgacttgccga 39




>54809_vvi-miR169g:pmrd
          Length = 121

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 12 gaaagtagtgtgcagccaaggatgacttgccgact 46
          |||||||  ||||||||||||||||||||||||||
Sbjct: 1  gaaagtatggtgcagccaaggatgacttgccgact 35



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 132 cggcaagttgtctttggctacat 154
           |||||||||||||||||||||||
Sbjct: 88  cggcaagttgtctttggctacat 110




>51652_ptc-miR169a:pmrd
          Length = 165

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 22 tgcagccaaggatgacttgccgact 46
          |||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgact 33




>48309_bdi-miR169a:pmrd
          Length = 121

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 22 tgcagccaaggatgacttgccgact 46
          |||||||||||||||||||||||||
Sbjct: 14 tgcagccaaggatgacttgccgact 38




>55004_zma-miR169b:pmrd
          Length = 156

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 gtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccga 41




>55003_zma-miR169a:pmrd
          Length = 130

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 gtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccga 41




>54808_vvi-miR169f:pmrd
          Length = 184

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 gtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccga 33




>54549_sly-miR169c:pmrd
          Length = 147

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 gtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||
Sbjct: 38 gtgcagccaaggatgacttgccga 61




>52003_ptc-miRf10181-akr:pmrd
          Length = 113

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 tgcagccaaggatgacttgccgac 45
          ||||||||||||||||||||||||
Sbjct: 8  tgcagccaaggatgacttgccgac 31




>51660_ptc-miR169c:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 tgcagccaaggatgacttgccgac 45
          ||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgac 32




>51659_ptc-miR169b:pmrd
          Length = 113

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 tgcagccaaggatgacttgccgac 45
          ||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgac 32




>48876_osa-miR169a:pmrd
          Length = 173

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 21 gtgcagccaaggatgacttgccga 44
          ||||||||||||||||||||||||
Sbjct: 35 gtgcagccaaggatgacttgccga 58




>48718_mtr-miR169b:pmrd
          Length = 121

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 tgcagccaaggatgacttgccgac 45
          ||||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgac 42




>48717_mtr-miR169a:pmrd
          Length = 121

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 tgcagccaaggatgacttgccgac 45
          ||||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgac 42




>54825_vvi-miR169w:pmrd
          Length = 143

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 gtgcagccaaggatgacttgccg 43
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32




>54813_vvi-miR169k:pmrd
          Length = 122

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 gtgcagccaaggatgacttgccg 43
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32




>54812_vvi-miR169j:pmrd
          Length = 122

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 gtgcagccaaggatgacttgccg 43
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32




>51663_ptc-miR169f:pmrd
          Length = 239

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 gtgcagccaaggatgacttgccg 43
          |||||||||||||||||||||||
Sbjct: 8  gtgcagccaaggatgacttgccg 30




>48562_gma-miR169b:pmrd
          Length = 183

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 22 tgcagccaaggatgacttgccga 44
          |||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccga 31




>55021_zma-miR169s:pmrd
          Length = 150

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 cagccaaggatgacttgccgac 45
          ||||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccgac 22




>55005_zma-miR169c:pmrd
          Length = 134

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>54821_vvi-miR169s:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>54805_vvi-miR169c:pmrd
          Length = 90

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>54803_vvi-miR169a:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>54547_sly-miR169a:pmrd
          Length = 149

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccg 60




>54367_ptr-miR169a:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 cagccaaggatgacttgccgac 45
          ||||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccgac 22




>51664_ptc-miR169g:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>51661_ptc-miR169d:pmrd
          Length = 111

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>51339_phy-miR169:pmrd
          Length = 146

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 13 tgcagccaaggatgacttgccg 34




>50631_osa-miRf11416-akr:pmrd
          Length = 141

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 22  tgcagccaaggatgacttgccg 43
           ||||||||||||||||||||||
Sbjct: 125 tgcagccaaggatgacttgccg 104




>50630_osa-miRf11415-akr:pmrd
          Length = 147

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 20 tgcagccaaggatgacttgccg 41




>49845_osa-miRf10630-akr:pmrd
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 22  tgcagccaaggatgacttgccg 43
           ||||||||||||||||||||||
Sbjct: 105 tgcagccaaggatgacttgccg 84




>48891_osa-miR169p:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 22  tgcagccaaggatgacttgccg 43
           ||||||||||||||||||||||
Sbjct: 118 tgcagccaaggatgacttgccg 97




>48878_osa-miR169c:pmrd
          Length = 112

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>48877_osa-miR169b:pmrd
          Length = 128

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>48719_mtr-miR169c:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 24 cagccaaggatgacttgccgac 45
          ||||||||||||||||||||||
Sbjct: 82 cagccaaggatgacttgccgac 61




>48561_gma-miR169a:pmrd
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>47961_ath-miRf10861-akr:pmrd
          Length = 109

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 3  tgcagccaaggatgacttgccg 24




>47674_ath-miRf10574-akr:pmrd
          Length = 123

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 22  tgcagccaaggatgacttgccg 43
           ||||||||||||||||||||||
Sbjct: 114 tgcagccaaggatgacttgccg 93




>46961_ath-miR169b:pmrd
          Length = 181

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 41 tgcagccaaggatgacttgccg 62




>46875_aqc-miR169c:pmrd
          Length = 111

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tgcagccaaggatgacttgccg 43
          ||||||||||||||||||||||
Sbjct: 3  tgcagccaaggatgacttgccg 24




>55023_zma-miR169u:pmrd
          Length = 90

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 cagccaaggatgacttgccga 44
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccga 21




>55022_zma-miR169t:pmrd
          Length = 116

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 cagccaaggatgacttgccga 44
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccga 21




>54437_sbi-miR169a:pmrd
          Length = 91

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 cagccaaggatgacttgccga 44
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccga 21




>51662_ptc-miR169e:pmrd
          Length = 166

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 gcagccaaggatgacttgccg 43
          |||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccg 30




>48563_gma-miR169c:pmrd
          Length = 115

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 25 agccaaggatgacttgccgac 45
          |||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgac 32




>46859_ama-miR169:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 25 agccaaggatgacttgccgac 45
          |||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgccgac 35



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 131 tcggcaagttgtctttggctacatc 155
           |||||||||| ||||||||||||||
Sbjct: 67  tcggcaagttatctttggctacatc 91




>55020_zma-miR169r:pmrd
          Length = 95

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>54447_sbi-miR169k:pmrd
          Length = 97

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>54438_sbi-miR169b:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>54091_ptc-miRf12269-akr:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  cagccaaggatgacttgccg 43
           ||||||||||||||||||||
Sbjct: 111 cagccaaggatgacttgccg 92




>52526_ptc-miRf10704-akr:pmrd
          Length = 120

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  cagccaaggatgacttgccg 43
           ||||||||||||||||||||
Sbjct: 110 cagccaaggatgacttgccg 91




>51676_ptc-miR169s:pmrd
          Length = 120

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccg 31




>51665_ptc-miR169h:pmrd
          Length = 118

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30




>48880_osa-miR169e:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 20 tgtgcagccaaggatgacttgccg 43
          |||| |||||||||||||||||||
Sbjct: 7  tgtgtagccaaggatgacttgccg 30




>48639_gso-miR169a:pmrd
          Length = 103

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>48564_gma-miR169p:pmrd
          Length = 111

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 cagccaaggatgacttgccg 43
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>46964_ath-miR169e:pmrd
          Length = 217

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 25 agccaaggatgacttgccga 44
          ||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccga 90




>46963_ath-miR169d:pmrd
          Length = 154

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 25 agccaaggatgacttgccga 44
          ||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62




>46962_ath-miR169c:pmrd
          Length = 411

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 24  cagccaaggatgacttgccg 43
           ||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccg 132