miRNEST 2.0, an integrative microRNA resource :: BLAST
>51610_ptc-miR160c:pmrd
Length = 98
Score = 107 bits (54), Expect = 2e-24
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtgga 71
|||||||||||||||||||||||| ||||||||| |||| ||| | |||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcga-tggcctccgtgga 69
Query: 72 tggcgtatgaggagccaagcatattc 97
||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95
>51609_ptc-miR160b:pmrd
Length = 98
Score = 99.6 bits (50), Expect = 4e-22
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtgga 71
|||||||||||||||||||||||| ||||||||| ||| || | ||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaacgg-atcctcgatggcctccgtgga 69
Query: 72 tggcgtatgaggagccaagcatattc 97
||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95
>54783_vvi-miR160f:pmrd
Length = 102
Score = 95.6 bits (48), Expect = 6e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 8 tatatgcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccg 67
|||||||||||||||||||||||||||| ||||||||| ||| | | | ||||||| ||
Sbjct: 7 tatatgcctggctccctgtatgccatttgcagagcccaccggcacat-cgatggccttcg 65
Query: 68 tggatggcgtatgaggagccaagcatat 95
||||||||||||||||||||| ||||||
Sbjct: 66 tggatggcgtatgaggagccatgcatat 93
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 81.8 bits (41), Expect = 9e-17
Identities = 77/87 (88%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgt 68
|||||||||||||||||||||||| | | |||||||||| |||| | ||| |||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtat---cgatgacctccgt 58
Query: 69 ggatggcgtatgaggagccaagcatat 95
|||||||||||||||||||| ||||||
Sbjct: 59 ggatggcgtatgaggagccatgcatat 85
>46934_ath-miR160a:pmrd
Length = 85
Score = 81.8 bits (41), Expect = 9e-17
Identities = 77/87 (88%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgt 68
|||||||||||||||||||||||| | | |||||||||| |||| | ||| |||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtat---cgatgacctccgt 58
Query: 69 ggatggcgtatgaggagccaagcatat 95
|||||||||||||||||||| ||||||
Sbjct: 59 ggatggcgtatgaggagccatgcatat 85
>48542_gma-miR160a:pmrd
Length = 119
Score = 69.9 bits (35), Expect = 3e-13
Identities = 79/92 (85%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 7 gtatatgcctggctccctgtatgccattttcagagcccatcg--gtatttccaatggcct 64
|||| |||||||||||||||||||||||| ||||| ||||| | || ||||| |||
Sbjct: 16 gtatgtgcctggctccctgtatgccatttgtagagctcatcgaagcat---caatgacct 72
Query: 65 ccgtggatggcgtatgaggagccaagcatatt 96
||||||||||||||||||||||||||||||
Sbjct: 73 ttgtggatggcgtatgaggagccaagcatatt 104
>48704_mtr-miR160e:pmrd
Length = 91
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 67 gtggatggcgtatgaggagccaagcatattcc 98
||||||||||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattcc 91
>48702_mtr-miR160b:pmrd
Length = 91
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 67 gtggatggcgtatgaggagccaagcatattcc 98
||||||||||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattcc 91
>54541_sly-miR160a:pmrd
Length = 129
Score = 61.9 bits (31), Expect = 8e-11
Identities = 79/94 (84%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 7 gtatatgcctggctccctgtatgccattttcagagcccatcg--gtatttccaatggcct 64
||||||||||||||||||||||||||||| || ||| || || ||| || | |||||
Sbjct: 15 gtatatgcctggctccctgtatgccatttgcaaagctcaccgtaatatatcgatgggcct 74
Query: 65 ccgtggatggcgtatgaggagccaagcatattcc 98
|| ||||||||||||||||||||||||||||
Sbjct: 75 tgttgaatggcgtatgaggagccaagcatattcc 108
>48397_bra-miR160a:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 cctccgtggatggcgtatgaggagccaagcatatt 96
|||||||| |||||||||||||||||| |||||||
Sbjct: 74 cctccgtgaatggcgtatgaggagccatgcatatt 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccat 33
||||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgccat 47
>48396_bra-miR160a:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 cctccgtggatggcgtatgaggagccaagcatatt 96
|||||||| |||||||||||||||||| |||||||
Sbjct: 74 cctccgtgaatggcgtatgaggagccatgcatatt 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccat 33
||||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgccat 47
>54781_vvi-miR160d:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccattt 35
|||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccattt 34
>54942_zma-miR160e:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>54675_tae-miR160:pmrd
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>48829_osa-miR160d:pmrd
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>48703_mtr-miR160d:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccattt 35
||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccattt 29
>48658_hvv-miR160a:pmrd
Length = 344
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 321 atatgcctggctccctgtatgcca 344
>46865_aqc-miR160b:pmrd
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccattt 35
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccattt 24
>54943_zma-miR160f:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcc 31
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 10 tatgcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>48830_osa-miR160e:pmrd
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcc 31
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>46936_ath-miR160c:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>54946_zma-miR160i:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>54574_smo-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccat 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54940_zma-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>54780_vvi-miR160c:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48828_osa-miR160c:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>48827_osa-miR160b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>48826_osa-miR160a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>48635_gra-miR160b:pmrd
Length = 293
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcc 31
|||||||||||||||||||||
Sbjct: 272 atgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcc 31
|||||||||||||||||||||
Sbjct: 85 atgcctggctccctgtatgcc 105
>48306_bdi-miR160:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcc 31
|||||||||||||||||||||
Sbjct: 17 atgcctggctccctgtatgcc 37
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>54760_ttu-miR160b:pmrd
Length = 218
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcc 31
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>54528_sce-miR160:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcc 31
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>51615_ptc-miR160h:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccattt 35
|||||||||||||| |||||||||
Sbjct: 11 tgcctggctccctgcatgccattt 34
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgtatgcca 32
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgtatgcca 32
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48659_hvv-miR160b:pmrd
Length = 47
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcc 31
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48544_gma-miR160o:pmrd
Length = 503
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcc 31
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48543_gma-miR160n:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcc 31
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
