miRNEST 2.0, an integrative microRNA resource :: BLAST
>48337_bna-miR156b:pmrd
Length = 208
Score = 206 bits (104), Expect = 4e-54
Identities = 141/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 88
Query: 72 ctgtggatgattacaaaaataaaaccaattcaaa--nnnnnnnnnnnnnncctgcatgtc 129
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 89 ctgtggatgattacaaaaataaaaccaattcaaaagagagagagagagagcctgcatgtc 148
Query: 130 tactctttcgtgctctctatacttctgtcaccaccat 166
|||||||||||||||||||||||||||||||||||||
Sbjct: 149 tactctttcgtgctctctatacttctgtcaccaccat 185
>48393_bra-miR157a:pmrd
Length = 149
Score = 161 bits (81), Expect = 2e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 77
Query: 72 ctgtggatgattacaaaaata 92
|||||||||||||||||||||
Sbjct: 78 ctgtggatgattacaaaaata 98
Score = 93.7 bits (47), Expect = 4e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 120 cctgcatgtctactctttcgtgctctctatacttctgtcaccaccat 166
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cctgcatgtctactctttcgtgctctctatacttctgtcaccaccat 146
>46926_ath-miR157c:pmrd
Length = 217
Score = 109 bits (55), Expect = 7e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 71
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 28 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 87
Query: 72 ctgtggatgat 82
||||||||||
Sbjct: 88 atgtggatgat 98
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 120 cctgcatgtctactctttcgtgctctctatacttctgtcaccacc 164
||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 149 cctgcatctctactcttttgtgctctctatacttctgtcaccacc 193
>48384_bol-miR157a:pmrd
Length = 106
Score = 75.8 bits (38), Expect = 9e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgcaagtaca 49
||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcactaaggatgacatgcaagtaca 47
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 130 tactctttcgtgctctctatacttctgtca 159
|||||||| |||||||||||||||||||||
Sbjct: 72 tactcttttgtgctctctatacttctgtca 101
>48338_bna-miR156c:pmrd
Length = 155
Score = 75.8 bits (38), Expect = 9e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgcaagtaca 49
||||||||||||||||||||||||||||||||||||||
Sbjct: 22 cagaagatagagagcactaaggatgacatgcaagtaca 59
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 120 cctgcatgtctactctttcgtgctctctatacttctgtca 159
||||||| | |||||||| |||||||||||||||||||||
Sbjct: 98 cctgcatctttactcttttgtgctctctatacttctgtca 137
>46927_ath-miR157d:pmrd
Length = 221
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatg 36
|||||||||||||||||||||||||
Sbjct: 27 cagaagatagagagcactaaggatg 51
>48698_mtr-miR157:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgca 43
|||||||||||| ||||||||||||| |||||
Sbjct: 5 cagaagatagagggcactaaggatgatatgca 36
>54661_stu-miR157a:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgc 42
|||||||||||||||||||| ||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>54532_sly-miR156a:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgc 42
|||||||||||||||||||| ||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>48531_gma-miR156d:pmrd
Length = 151
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 130 tactctttcgtgctctctatacttctgtcaccacc 164
||||| || ||||||||||||||||||||| ||||
Sbjct: 102 tactcctttgtgctctctatacttctgtcatcacc 136
>48642_han-miR157a:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 131 actctttcgtgctctctatacttctgtca 159
|||| |||||||||||||| |||||||||
Sbjct: 57 actccttcgtgctctctatgcttctgtca 85
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 136 ttcgtgctctctatacttctgtca 159
|||||||||||||| |||||||||
Sbjct: 77 ttcgtgctctctattcttctgtca 100
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgca 43
|||||||||||||||||| | ||||| |||||
Sbjct: 6 cagaagatagagagcactgacgatgaaatgca 37
>51598_ptc-miR156h:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgca 43
|||||||||||||||||| | ||||| |||||
Sbjct: 15 cagaagatagagagcactgacgatgaaatgca 46
>48537_gma-miR157c:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 12 cagaagatagagagcactaaggatgacatgca 43
|||||||||||||||||| | ||||| |||||
Sbjct: 80 cagaagatagagagcactgatgatgaaatgca 49
>48532_gma-miR156e:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 12 cagaagatagagagcactaaggatgacatgca 43
|||||||||||||||||| | ||||| |||||
Sbjct: 25 cagaagatagagagcactgatgatgaaatgca 56
