miRNEST 2.0, an integrative microRNA resource :: BLAST
>54784_vvi-miR162:pmrd
Length = 103
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccagcgttcac 155
|||||||||||||||||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcgttcac 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 gtcactggatgcagcggttcatcgatctgttcc 40
|||||||||||||||||||||||||||| ||||
Sbjct: 5 gtcactggatgcagcggttcatcgatctcttcc 37
>54542_sly-miR162:pmrd
Length = 99
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 114 gcaaaaggaatcggtcgataaacctctgcatccag 148
|||||||||||||||||||||||||||||||||||
Sbjct: 65 gcaaaaggaatcggtcgataaacctctgcatccag 99
>54948_zma-miR162b:pmrd
Length = 130
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 120 ggaatcggtcgataaacctctgcatccag 148
|||||||||||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130
>48707_mtr-miR162d:pmrd
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ctggatgcagcggttcatcgatctgttcc 40
|||||||||||||||||||||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccag 148
||||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 12 ctggatgcagcggttcatcgatctgttcc 40
|||||||||||||||||||||||||||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcc 58
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 121 gaatcggtcgataaacctctgcatcca 147
|||||||||||||||||||||||||||
Sbjct: 27 gaatcggtcgataaacctctgcatcca 1
>48545_gma-miR162a:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 gtcactggatgcagcggttcatcgatctgttcc 40
|||||||||||||||||||||||||||| ||||
Sbjct: 6 gtcactggatgcagcggttcatcgatctcttcc 38
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccagcgttcac 155
|||||| ||||||||||||||||||||||| ||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgctcac 100
>48705_mtr-miR162b:pmrd
Length = 85
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 13 tggatgcagcggttcatcgatctgttcc 40
||||||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatcca 147
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>48423_cpa-miR162a:pmrd
Length = 109
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccagcgtt 152
|||||| |||||||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatccagcgtt 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 gtcactggatgcagcggttcatcgatctgttcc 40
||||||||| |||||||||||||||||| ||||
Sbjct: 9 gtcactggaggcagcggttcatcgatctcttcc 41
>48493_ghr-miR162a:pmrd
Length = 148
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccagcg 150
|||||| |||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccagcg 116
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcc 52
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 121 gaatcggtcgataaacctctgcatccagcg 150
|||||| |||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccagcg 13
>46938_ath-miR162b:pmrd
Length = 111
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccagcg 150
|||||| |||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcg 101
>54387_rco-miR162:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccagc 149
|||||| ||||||||||||||||||||||
Sbjct: 68 gaatcgatcgataaacctctgcatccagc 96
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 1 cactggaggcagcggttcatcgatctcttcc 31
>48834_osa-miR162a:pmrd
Length = 171
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 120 ggaatcggtcgataaacctctgcatccag 148
||||||| |||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccag 163
>48685_lsa-miR162:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 128 tcgataaacctctgcatccagcgttcacc 156
||||||||||||||||||||||| |||||
Sbjct: 1 tcgataaacctctgcatccagcgctcacc 29
>46937_ath-miR162a:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 128 tcgataaacctctgcatccagcgtt 152
|||||||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatccagcgtt 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 ctggatgcagcggttcatcgatctgttcc 40
||||| |||||||||||||||||| ||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcc 53
>48690_mdo-miR162:pmrd
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccag 148
|||||||||||||||||| |||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatccag 88
>48682_llu-miR162:pmrd
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 gaatcggtcgataaacctctgcatccag 148
|||||| |||||||||||||||||||||
Sbjct: 53 gaatcgatcgataaacctctgcatccag 80
>48546_gma-miR162m:pmrd
Length = 367
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 128 tcgataaacctctgcatccagcgttcac 155
||||||||||||||||||||||| ||||
Sbjct: 1 tcgataaacctctgcatccagcgctcac 28
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 96 cactggaggcagcggttcatcgatcttttcc 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 128 tcgataaacctctgcatccag 148
|||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatccag 7
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 98 cactggaggcagcggttcatcgatcttttcc 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 128 tcgataaacctctgcatccag 148
|||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatccag 9
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 128 tcgataaacctctgcatccagcg 150
|||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcg 6
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 97 cactggaggcagcggttcatcgatctcttcc 67
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 128 tcgataaacctctgcatccagcg 150
|||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcg 6
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 97 cactggaggcagcggttcatcgatctcttcc 67
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 98 cactggaggcagcggttcatcgatcttttcc 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 128 tcgataaacctctgcatccag 148
|||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatccag 9
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 96 cactggaggcagcggttcatcgatcttttcc 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 128 tcgataaacctctgcatccag 148
|||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatccag 7
>51618_ptc-miR162c:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcc 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 128 tcgataaacctctgcatccag 148
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>51617_ptc-miR162b:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcc 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 128 tcgataaacctctgcatccag 148
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>51616_ptc-miR162a:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
||||||| |||||||||||||||||| ||||
Sbjct: 9 cactggaggcagcggttcatcgatctcttcc 39
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 128 tcgataaacctctgcatccagcg 150
|||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcg 100
>48836_osa-miR162m:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 aggaatcggtcgataaacctctgcatccag 148
|||||||| ||||||| |||||||||||||
Sbjct: 85 aggaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 119 aggaatcggtcgataaacctctgcatccag 148
|||||||| ||||||| |||||||||||||
Sbjct: 95 aggaatcgatcgataagcctctgcatccag 124
