miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 264 bits (133), Expect = 2e-71
Identities = 177/188 (94%), Gaps = 4/188 (2%)
Strand = Plus / Plus
Query: 9 aagtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 68
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 60
Query: 69 atggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgc 127
||| |||||||||||||||| ||||| | ||| |||||||||| ||||||||||||| |
Sbjct: 61 atgaatcccataagccctaatccttatatata--aaaaggattt-ggttatatggcttac 117
Query: 128 atatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaaggga 187
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 118 atatctcaggagctttaacttgccctttaattgcttttactcttctttggattgaaggga 177
Query: 188 gctctaca 195
||||||||
Sbjct: 178 gctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 260 bits (131), Expect = 4e-70
Identities = 175/186 (94%), Gaps = 4/186 (2%)
Strand = Plus / Plus
Query: 11 gtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 70
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcat 129
| |||||||||||||||| ||||| | ||| |||||||||| ||||||||||||| |||
Sbjct: 61 gaatcccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacat 117
Query: 130 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 189
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118 atctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagc 177
Query: 190 tctaca 195
||||||
Sbjct: 178 tctaca 183
>46931_ath-miR159a:pmrd
Length = 184
Score = 256 bits (129), Expect = 6e-69
Identities = 173/185 (93%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 11 gtagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 70
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcat 129
|||||||||||||||||| |||| | | ||||||||||| |||||||||| ||||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcat 119
Query: 130 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 179
Query: 190 tctac 194
|||||
Sbjct: 180 tctac 184
>46932_ath-miR159b:pmrd
Length = 196
Score = 95.6 bits (48), Expect = 1e-20
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 13 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 72
|||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
Query: 73 atcccataagcc 84
||||||||||||
Sbjct: 64 atcccataagcc 75
>48701_mtr-miR159c:pmrd
Length = 44
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatctt 199
|||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatctt 27
>48539_gma-miR159a:pmrd
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 169 cttctttggattgaagggagctctaca 195
|||||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctctaca 197
>54378_pvu-miR159:pmrd
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 169 cttctttggattgaagggagctctac 194
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 169 cttctttggattgaagggagctctac 194
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>48819_osa-miR159a:pmrd
Length = 272
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatcttt 200
|||||||||||||||||||||| |||||||
Sbjct: 240 tctttggattgaagggagctctgcatcttt 269
>48796_oru-miR159:pmrd
Length = 274
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatcttt 200
|||||||||||||||||||||| |||||||
Sbjct: 240 tctttggattgaagggagctctgcatcttt 269
>48728_mtr-miR319b:pmrd
Length = 42
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 174 ttggattgaagggagctctacatctt 199
||||||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatctt 26
>48820_osa-miR159b:pmrd
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatctt 199
|||||||||||||||||||||| ||||||
Sbjct: 156 tctttggattgaagggagctctgcatctt 184
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatct 198
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 aagctgctaagctatggatcc 76
|||||||||||||||||||||
Sbjct: 49 aagctgctaagctatggatcc 69
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 aagctgctaagctatggatcc 76
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 ggcttgcatatctcaggagcttta 144
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 aagctgctaagctatggatcc 76
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48699_mtr-miR159a:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 170 ttctttggattgaagggagctcta 193
||||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctcta 168
>54931_zma-miR159b:pmrd
Length = 221
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatctt 199
|||||||||||||||||||| ||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>54930_zma-miR159a:pmrd
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>54777_vvi-miR159c:pmrd
Length = 190
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctaca 195
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 tggcttgcatatctcaggagct 141
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>54631_sof-miR159d:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>54629_sof-miR159b:pmrd
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>54628_sof-miR159a:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctctacatc 197
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctaca 195
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48656_hvv-miR159a:pmrd
Length = 303
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatctt 199
|||||||||||||||||||| ||||||
Sbjct: 1 tttggattgaagggagctctgcatctt 27
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tctttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 174 ttggattgaagggagctctaca 195
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatc 197
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctacatc 197
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54540_sly-miR159:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctcta 193
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>48821_osa-miR159c:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 174 ttggattgaagggagctctacatct 198
|||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192
