miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48328_bdi-miR2504b:pmrd
Length = 128
Score = 159 bits (80), Expect = 8e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaatctactaagaatatcaaatg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcaaacttcttcatgtttgaccaagtttatagaaaaatctactaagaatatcaaatg 60
Query: 73 agcgtgctatgaaaatatat 92
||||||||||||||||||||
Sbjct: 61 agcgtgctatgaaaatatat 80
Score = 95.6 bits (48), Expect = 1e-20
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 124 cttgtagatttttctaaaaacttggtcagacttgaagaagtttgactt 171
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cttgtagatttttctaaaaacttggtcagacttgaagaagtttgactt 128
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 127 gtagatttttctaaaaacttggtcagacttgaagaagtttgactt 171
||||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 45 gtagatttttctataaacttggtcaaacatgaagaagtttgactt 1
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaatctac 57
|||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 128 aagtcaaacttcttcaagtctgaccaagtttttagaaaaatctac 84
>48988_osa-miR437:pmrd
Length = 213
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 6 ttgtcataagtcaaacttcttcatgtttgaccaagtttatagaaaaatctactaagaa 63
||||| |||||||||||||| | |||||||||||||||||||||||| || |||||
Sbjct: 182 ttgtcctaagtcaaacttctctaactttgaccaagtttatagaaaaatcaaccaagaa 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 130 gatttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||||| ||||||||||| | || |||||||||||||
Sbjct: 134 gatttttctataaacttggtcaaagttagagaagtttgactt 175
>48987_osa-miR437:pmrd
Length = 213
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 6 ttgtcataagtcaaacttcttcatgtttgaccaagtttatagaaaaatctactaagaa 63
||||| |||||||||||||| | |||||||||||||||||||||||| || |||||
Sbjct: 182 ttgtcctaagtcaaacttctctaactttgaccaagtttatagaaaaatcaaccaagaa 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 130 gatttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||||| ||||||||||| | || |||||||||||||
Sbjct: 134 gatttttctataaacttggtcaaagttagagaagtttgactt 175
>48986_osa-miR437:pmrd
Length = 213
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 6 ttgtcataagtcaaacttcttcatgtttgaccaagtttatagaaaaatctactaagaa 63
||||| |||||||||||||| | |||||||||||||||||||||||| || |||||
Sbjct: 182 ttgtcctaagtcaaacttctctaactttgaccaagtttatagaaaaatcaaccaagaa 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 130 gatttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||||| ||||||||||| | || |||||||||||||
Sbjct: 134 gatttttctataaacttggtcaaagttagagaagtttgactt 175
>55109_zma-miR437c:pmrd
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 15 gtcaaacttcttcatgtttgaccaagtttatagaaaa 51
|||||||||||||| |||||||||||||||||||||
Sbjct: 1 gtcaaacttcttcagctttgaccaagtttatagaaaa 37
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 133 ttttctaaaaacttggtcagacttgaagaagtttgac 169
||||||| ||||||||||| | ||||||||||||||
Sbjct: 37 ttttctataaacttggtcaaagctgaagaagtttgac 1
>55108_zma-miR437b:pmrd
Length = 168
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaa 51
|||||||||||||| || |||||||||||||||||||||
Sbjct: 1 taagtcaaacttctgtatctttgaccaagtttatagaaaa 40
>55111_zma-miR437e:pmrd
Length = 182
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
||||||||||||||| | || ||||||||||||||||||||
Sbjct: 181 taagtcaaacttctttaacttcgaccaagtttatagaaaaat 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 131 atttttctaaaaacttggtcagacttgaagaagtttgactt 171
||||||||| |||||||||| | || ||||||||||||||
Sbjct: 140 atttttctataaacttggtcgaagttaaagaagtttgactt 180
>55112_zma-miR437f:pmrd
Length = 342
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaaa 52
|||||||||||||| | ||||||||||||||||||||||
Sbjct: 1 taagtcaaacttctctaactttgaccaagtttatagaaaaa 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 132 tttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||| ||||||||||| | || |||||||||||||
Sbjct: 41 tttttctataaacttggtcaaagttagagaagtttgactt 2
>55107_zma-miR437a:pmrd
Length = 342
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaaa 52
|||||||||||||| | ||||||||||||||||||||||
Sbjct: 342 taagtcaaacttctctaactttgaccaagtttatagaaaaa 302
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 132 tttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||| ||||||||||| | || |||||||||||||
Sbjct: 302 tttttctataaacttggtcaaagttagagaagtttgactt 341
>54516_sbi-miR437t:pmrd
Length = 170
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
||||||||||||| | |||||||||||||||||||||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttatagaaaaat 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 131 atttttctaaaaacttggtcagacttgaagaagtttgactt 171
||||||||| ||||||||||| | || |||||||||||||
Sbjct: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
>54507_sbi-miR437k:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 131 atttttctaaaaacttggtcagacttgaagaagtttgactt 171
||||||||||||||||||||| | || |||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
|||||||||||||| | ||||||||||||| |||||||||
Sbjct: 171 taagtcaaacttctctaactttgaccaagtttttagaaaaat 130
>54500_sbi-miR437b:pmrd
Length = 171
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
||||||||||||| | |||||||||||||||||||||||
Sbjct: 171 aagtcaaacttctctaactttgaccaagtttatagaaaaat 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 131 atttttctaaaaacttggtcagacttgaagaagtttgactt 171
||||||||| ||||||||||| | || |||||||||||||
Sbjct: 131 atttttctataaacttggtcaaagttagagaagtttgactt 171
>54504_sbi-miR437g:pmrd
Length = 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaa 51
|||||||||||||| | |||||||||||||||||||||
Sbjct: 175 taagtcaaacttctctaactttgaccaagtttatagaaaa 136
>54503_sbi-miR437f:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaa 51
|||||||||||||| | |||||||||||||||||||||
Sbjct: 173 taagtcaaacttctctaactttgaccaagtttatagaaaa 134
>48329_bdi-miR2504c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 30 gtttgaccaagtttatagaaaaatctac 57
|||||||||||||||| |||||||||||
Sbjct: 8 gtttgaccaagtttattgaaaaatctac 35
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 30 gtttgaccaagtttatagaa 49
||||||||||||||||||||
Sbjct: 93 gtttgaccaagtttatagaa 74
>51322_pci-miR437:pmrd
Length = 166
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaa 50
|||||||||||||| | ||||||||||||||||||||
Sbjct: 40 taagtcaaacttctctagctttgaccaagtttatagaaa 78
>54514_sbi-miR437r:pmrd
Length = 180
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 31 tttgaccaagtttatagaaaaatctactaa 60
||||||||||| ||||||||||| ||||||
Sbjct: 18 tttgaccaagtctatagaaaaatgtactaa 47
>54510_sbi-miR437n:pmrd
Length = 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 11 ataagtcaaacttcttcatgtttgaccaagtttatagaaaaatctactaa 60
||||||||||||||| | ||| ||||||||| ||||||||| ||||||
Sbjct: 182 ataagtcaaacttctctaactttaaccaagtttgtagaaaaatatactaa 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tttgaccaagtttatagaaaa 51
|||||||||||||||||||||
Sbjct: 19 tttgaccaagtttatagaaaa 39
>54518_sbi-miR437v:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
||||||||||||| | |||| ||||||||||||||||||
Sbjct: 114 aagtcaaacttctctaactttgtccaagtttatagaaaaat 74
>54517_sbi-miR437u:pmrd
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
||||||||||||| | ||| |||||||||||||||||||
Sbjct: 164 aagtcaaacttctctaactttcaccaagtttatagaaaaat 124
>54512_sbi-miR437p:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 12 taagtcaaacttcttcatgtttgaccaagtttatagaaaaa 52
|||||||||||||| | ||||||||||||||| ||||||
Sbjct: 187 taagtcaaacttctctaactttgaccaagtttattgaaaaa 147
>54508_sbi-miR437l:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 131 atttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||||||||||||| || | || |||||||||||||
Sbjct: 130 atttttctaaaaacttggccaaagttagagaagtttgactt 170
>54506_sbi-miR437j:pmrd
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tttgaccaagtttatagaaaa 51
|||||||||||||||||||||
Sbjct: 17 tttgaccaagtttatagaaaa 37
>54505_sbi-miR437i:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaat 53
||||||||||||| | |||||| ||||||||||||||||
Sbjct: 170 aagtcaaacttctctaactttgacaaagtttatagaaaaat 130
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 134 tttctaaaaacttggtcagacttgaagaagtttgac 169
|||||| ||||||||||| | || ||||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 15 gtcaaacttcttcatgtttgaccaagtttatagaaa 50
|||||||||||| | ||||||||||||| ||||||
Sbjct: 1 gtcaaacttctttaactttgaccaagtttctagaaa 36
>54502_sbi-miR437e:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 131 atttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||| |||||||||||| | || |||||||||||||
Sbjct: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
>54651_sof-miR437:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 132 tttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||||||||||| ||| | || |||||||||||||
Sbjct: 109 tttttctaaaaacttgatcaaagttagagaagtttgactt 148
>54519_sbi-miR437w:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 132 tttttctaaaaacttggtcagacttgaagaagtttgactt 171
|||||||||||||||||| | | || |||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
>54515_sbi-miR437s:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 13 aagtcaaacttcttcatgtttgaccaagtttatagaaaaa 52
|||||||||||||| | |||| ||| |||||||||||||
Sbjct: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
