miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48333_bdi-miR2507b:pmrd
          Length = 87

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 57  tttgaccaccaattagaccaacaaaatatgaattatgtattataaaaattata 109
           |||||||| ||||||||| |||||||| ||||| |||| ||||||||||||||
Sbjct: 2   tttgaccatcaattagactaacaaaatgtgaatgatgtgttataaaaattata 54



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 57 tttgaccaccaattagaccaa 77
          |||||||||||||||||||||
Sbjct: 86 tttgaccaccaattagaccaa 66




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 221 ccttatatcatggaacggagggagta 246
           ||||||||||||| ||||||||||||
Sbjct: 6   ccttatatcatgggacggagggagta 31




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 221 ccttatatcatggaacggagggagta 246
           ||||||||||||| ||||||||||||
Sbjct: 9   ccttatatcatgggacggagggagta 34




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  actccctccgttccataatataagg 32
          ||||||||||| |||||||||||||
Sbjct: 10 actccctccgtcccataatataagg 34




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  actccctccgttccataatataagg 32
          ||||||||||| |||||||||||||
Sbjct: 10 actccctccgtcccataatataagg 34




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 8   actccctccgttccataatataagg 32
           ||||||||||| |||||||||||||
Sbjct: 112 actccctccgtcccataatataagg 88



 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 8  actccctccgttccataatataag 31
          ||||||||||| ||||||||||||
Sbjct: 11 actccctccgtcccataatataag 34



 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 221 ccttatatcatggaacggagggagtata 248
           |||||||| |||| ||||||||||||||
Sbjct: 88  ccttatattatgggacggagggagtata 115




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 8  actccctccgttccataatataagg 32
          ||||||||||| |||||||||||||
Sbjct: 96 actccctccgtcccataatataagg 72



 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 221 ccttatatcatggaacggagggagtata 248
           |||||||| |||| ||||||||||||||
Sbjct: 72  ccttatattatgggacggagggagtata 99




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  actccctccgttccataatataagg 32
          ||||||||||| |||||||||||||
Sbjct: 8  actccctccgtcccataatataagg 32



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 8   actccctccgttccataatataagg 32
           ||||||||||| |||||||||||||
Sbjct: 120 actccctccgtcccataatataagg 96




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 8   actccctccgttccataatataagg 32
           ||||||||||| |||||||||||||
Sbjct: 126 actccctccgtcccataatataagg 102




>54695_tae-miR1120:pmrd
          Length = 119

 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 8  actccctccgttccataatataag 31
          ||||||||||| ||||||||||||
Sbjct: 19 actccctccgtcccataatataag 42