miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48310_bdi-miR169b:pmrd
Length = 106
Score = 202 bits (102), Expect = 7e-53
Identities = 105/106 (99%)
Strand = Plus / Plus
Query: 24 gagatagagagtggaatgtagccaaggatgacttgccaggtatgtgcatgtacgcttcag 83
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 gagatagagagtggaatgtagccaaggatgacttgccgggtatgtgcatgtacgcttcag 60
Query: 84 ggaattatatgcatccctggtctgaatccatgctgatatttcccgg 129
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaattatatgcatccctggtctgaatccatgctgatatttcccgg 106
>54803_vvi-miR169a:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 30 gagagtggaatgtagccaaggatgacttgcc 60
|||||||||||| ||||||||||||||||||
Sbjct: 1 gagagtggaatgcagccaaggatgacttgcc 31
>54813_vvi-miR169k:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 30 gagagtggaatgtagccaaggatgacttgcc 60
||||||||| || ||||||||||||||||||
Sbjct: 1 gagagtggagtgcagccaaggatgacttgcc 31
>54812_vvi-miR169j:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 30 gagagtggaatgtagccaaggatgacttgcc 60
||||||||| || ||||||||||||||||||
Sbjct: 1 gagagtggagtgcagccaaggatgacttgcc 31
>54438_sbi-miR169b:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccaggtatgtgcatg 73
|||||||||||||||||| | ||||||||||
Sbjct: 2 agccaaggatgacttgccggatatgtgcatg 32
>55017_zma-miR169o:pmrd
Length = 145
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 atgtagccaaggatgacttgcc 60
||||||||||||||||||||||
Sbjct: 121 atgtagccaaggatgacttgcc 142
>48877_osa-miR169b:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 109 atccatgctgatatttcccggcaggttgttcttggcta 146
||||||||||| |||| |||||| ||||| ||||||||
Sbjct: 81 atccatgctgacattttccggcaagttgtccttggcta 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 36 ggaatgtagccaaggatgacttgcc 60
|||||| ||||||||||||||||||
Sbjct: 5 ggaatgcagccaaggatgacttgcc 29
>55018_zma-miR169p:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 tgtagccaaggatgacttgcc 60
|||||||||||||||||||||
Sbjct: 1 tgtagccaaggatgacttgcc 21
>54816_vvi-miR169n:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 32 gagtggaatgtagccaaggatgacttgcc 60
||||||||| ||||||||||||||||||
Sbjct: 2 gagtggaatagagccaaggatgacttgcc 30
>54805_vvi-miR169c:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 32 gagtggaatgtagccaaggatgacttgcc 60
|||| ||||| ||||||||||||||||||
Sbjct: 3 gagtagaatgcagccaaggatgacttgcc 31
>54549_sly-miR169c:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 32 gagtggaatgtagccaaggatgacttgcc 60
||||||| || ||||||||||||||||||
Sbjct: 31 gagtggagtgcagccaaggatgacttgcc 59
>54446_sbi-miR169j:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 tgtagccaaggatgacttgcc 60
|||||||||||||||||||||
Sbjct: 1 tgtagccaaggatgacttgcc 21
>51664_ptc-miR169g:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 32 gagtggaatgtagccaaggatgacttgcc 60
|||| ||||| ||||||||||||||||||
Sbjct: 1 gagtagaatgcagccaaggatgacttgcc 29
>51661_ptc-miR169d:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 32 gagtggaatgtagccaaggatgacttgcc 60
|||| ||||| ||||||||||||||||||
Sbjct: 1 gagtcgaatgcagccaaggatgacttgcc 29
>48880_osa-miR169e:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 tgtagccaaggatgacttgcc 60
|||||||||||||||||||||
Sbjct: 9 tgtagccaaggatgacttgcc 29
>55019_zma-miR169q:pmrd
Length = 69
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 4 gtagccaaggatgacttgcc 23
>55016_zma-miR169n:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 1 gtagccaaggatgacttgcc 20
>55013_zma-miR169k:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>55011_zma-miR169i:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>55009_zma-miR169g:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>55008_zma-miR169f:pmrd
Length = 150
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>54826_vvi-miR169x:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 11 gtagccaaggatgacttgcc 30
>54821_vvi-miR169s:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 33 agtggaatgtagccaaggatgacttgcc 60
|||||| || ||||||||||||||||||
Sbjct: 4 agtggattgcagccaaggatgacttgcc 31
>54550_sly-miR169d:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 38 gtagccaaggatgacttgcc 57
>54548_sly-miR169b:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 170 gtagccaaggatgacttgcc 189
>54450_sbi-miR169n:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 2 gtagccaaggatgacttgcc 21
>54442_sbi-miR169f:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>54441_sbi-miR169e:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>54440_sbi-miR169d:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>54439_sbi-miR169c:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgcc 39
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcc 33
>51680_ptc-miR169w:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 9 gtagccaaggatgacttgcc 28
>51679_ptc-miR169v:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 9 gtagccaaggatgacttgcc 28
>51675_ptc-miR169r:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>51670_ptc-miR169m:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>51668_ptc-miR169k:pmrd
Length = 203
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>51666_ptc-miR169i:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>51652_ptc-miR169a:pmrd
Length = 165
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 33 agtggaatgtagccaaggatgacttgcc 60
||||| ||| ||||||||||||||||||
Sbjct: 2 agtggtatgcagccaaggatgacttgcc 29
>51339_phy-miR169:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 33 agtggaatgtagccaaggatgacttgcc 60
|||| |||| ||||||||||||||||||
Sbjct: 6 agtgaaatgcagccaaggatgacttgcc 33
>48888_osa-miR169m:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48885_osa-miR169j:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48884_osa-miR169i:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48883_osa-miR169h:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48882_osa-miR169g:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48881_osa-miR169f:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48718_mtr-miR169b:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 29 agagagtggaatgtagccaaggatgacttgcc 60
|||||| | |||| ||||||||||||||||||
Sbjct: 8 agagagagtaatgcagccaaggatgacttgcc 39
>48717_mtr-miR169a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 29 agagagtggaatgtagccaaggatgacttgcc 60
|||||| | |||| ||||||||||||||||||
Sbjct: 8 agagagagtaatgcagccaaggatgacttgcc 39
>48563_gma-miR169c:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 33 agtggaatgtagccaaggatgacttgcc 60
||||| ||| ||||||||||||||||||
Sbjct: 2 agtgggatgaagccaaggatgacttgcc 29
>48487_ghb-miR169a:pmrd
Length = 189
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 49 gtagccaaggatgacttgcc 68
>48361_bna-miR169l:pmrd
Length = 199
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 24 gtagccaaggatgacttgcc 43
>48360_bna-miR169k:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 33 gtagccaaggatgacttgcc 52
>48359_bna-miR169j:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 8 gtagccaaggatgacttgcc 27
>48358_bna-miR169i:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcc 33
>48357_bna-miR169h:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 36 gtagccaaggatgacttgcc 55
>48356_bna-miR169g:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 36 gtagccaaggatgacttgcc 55
>48355_bna-miR169f:pmrd
Length = 201
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 30 gtagccaaggatgacttgcc 49
>48354_bna-miR169e:pmrd
Length = 276
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 250 gtagccaaggatgacttgcc 269
>48353_bna-miR169d:pmrd
Length = 220
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 39 gtagccaaggatgacttgcc 58
>48352_bna-miR169c:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 25 gtagccaaggatgacttgcc 44
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 122 gtagccaaggatgacttgcc 103
>46974_ath-miR169n:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 44 gtagccaaggatgacttgcc 63
>46973_ath-miR169m:pmrd
Length = 212
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 41 gtagccaaggatgacttgcc 60
>46971_ath-miR169k:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 42 gtagccaaggatgacttgcc 61
>46970_ath-miR169j:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 50 gtagccaaggatgacttgcc 69
>46969_ath-miR169i:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 39 gtagccaaggatgacttgcc 58
>46968_ath-miR169h:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 45 gtagccaaggatgacttgcc 64
>46873_aqc-miR169a:pmrd
Length = 158
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gtagccaaggatgacttgcc 60
||||||||||||||||||||
Sbjct: 25 gtagccaaggatgacttgcc 44
