miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48326_bdi-miR2503:pmrd
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 cctccgtcctaaaataagtgacgtggatttgtaca 54
|||||||||| ||||||||||||||||||||||||
Sbjct: 6 cctccgtcctgaaataagtgacgtggatttgtaca 40
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 20 cctccgtcctaaaataagtgacgtggatttgta 52
|||||| ||| ||||||||||| ||||||||||
Sbjct: 81 cctccgccctgaaataagtgacatggatttgta 49
>49388_osa-miRf10173-akr:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagtagtata 91
|||||||||||||||||||||||||
Sbjct: 77 attgtgaaacggagggagtagtata 101
>49001_osa-miR441a:pmrd
Length = 153
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagtagta 89
|||||||||||||||||||||||
Sbjct: 123 attgtgaaacggagggagtagta 145
>49037_osa-miR809b:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagtagt 88
||||||||||||||||||||||
Sbjct: 126 attgtgaaacggagggagtagt 147
>48325_bdi-miR2502:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 20 cctccgtcctaaaataagtgacgtggatttgta 52
|||||||| ||||||| |||||||||||||||
Sbjct: 10 cctccgtctcaaaataactgacgtggatttgta 42
>54707_tae-miR1132:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 20 attgtgaaacggagggagta 1
>50672_osa-miRf11457-akr:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 108 attgtgaaacggagggagta 127
>50348_osa-miRf11133-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 20 attgtgaaacggagggagta 1
>50347_osa-miRf11132-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 88 attgtgaaacggagggagta 107
>50070_osa-miRf10855-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 58 attgtgaaacggagggagta 77
>49369_osa-miRf10154-akr:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 20 attgtgaaacggagggagta 1
>49041_osa-miR809f:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 20 attgtgaaacggagggagta 1
>49040_osa-miR809e:pmrd
Length = 161
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 20 attgtgaaacggagggagta 1
>49039_osa-miR809d:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 28 attgtgaaacggagggagta 9
>49017_osa-miR446:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 attgtgaaacggagggagta 86
||||||||||||||||||||
Sbjct: 142 attgtgaaacggagggagta 161
