miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48326_bdi-miR2503:pmrd
          Length = 86

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 37  aagtgacttagatttgtatagatttttatacaaattcacgtcccttatttccggatggag 96
           ||||||| | |||||||||||||| || ||||||| |||||| |||||||| ||| ||||
Sbjct: 66  aagtgacatggatttgtatagattcttgtacaaatccacgtcacttatttcaggacggag 7

                 
Query: 97  ggagta 102
           ||||||
Sbjct: 6   ggagta 1




>48325_bdi-miR2502:pmrd
          Length = 94

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                       
Query: 22  cctccgtcccaaaacaagtgacttagatttgtatagatttttatacaaattcacgtccct 81
           |||||||| ||||| || |||| | ||||||||||  || ||||||||||||||||| ||
Sbjct: 10  cctccgtctcaaaataactgacgtggatttgtataagttcttatacaaattcacgtcact 69

                                   
Query: 82  tatttccggatggagggagtatgt 105
           || ||| ||| |||||| ||||||
Sbjct: 70  taattcgggacggagggtgtatgt 93