miRNEST 2.0, an integrative microRNA resource :: BLAST
>48919_osa-miR393b:pmrd
Length = 132
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 ctagtggaggactccaaagggatcgcattgatct 35
||||||||||||||||||||||||||||||||||
Sbjct: 15 ctagtggaggactccaaagggatcgcattgatct 48
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 gatcagtgcaatccctttggaatt 113
||||||||||||||||||||||||
Sbjct: 101 gatcagtgcaatccctttggaatt 124
>48918_osa-miR393b:pmrd
Length = 132
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 ctagtggaggactccaaagggatcgcattgatct 35
||||||||||||||||||||||||||||||||||
Sbjct: 15 ctagtggaggactccaaagggatcgcattgatct 48
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 gatcagtgcaatccctttggaatt 113
||||||||||||||||||||||||
Sbjct: 101 gatcagtgcaatccctttggaatt 124
>55056_zma-miR393:pmrd
Length = 126
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gtggaggactccaaagggatcgcattgatct 35
|||||||||||||||||||||||||||||||
Sbjct: 12 gtggaggactccaaagggatcgcattgatct 42
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 87 caagatcagtgcaatccctttggaattctcgactcg 122
||||||||||||||||||||||||||| || |||||
Sbjct: 84 caagatcagtgcaatccctttggaattttccactcg 119
>55061_zma-miR393e:pmrd
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 caagatcagtgcaatccctttggaat 112
||||||||||||||||||||||||||
Sbjct: 26 caagatcagtgcaatccctttggaat 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 actccaaagggatcgcattgatct 35
||||||||||||||||||||||||
Sbjct: 89 actccaaagggatcgcattgatct 66
>55060_zma-miR393d:pmrd
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 caagatcagtgcaatccctttggaat 112
||||||||||||||||||||||||||
Sbjct: 26 caagatcagtgcaatccctttggaat 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 actccaaagggatcgcattgatct 35
||||||||||||||||||||||||
Sbjct: 91 actccaaagggatcgcattgatct 68
>55059_zma-miR393c:pmrd
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 caagatcagtgcaatccctttggaat 112
||||||||||||||||||||||||||
Sbjct: 64 caagatcagtgcaatccctttggaat 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 actccaaagggatcgcattgatct 35
||||||||||||||||||||||||
Sbjct: 1 actccaaagggatcgcattgatct 24
>55058_zma-miR393b:pmrd
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 caagatcagtgcaatccctttggaat 112
||||||||||||||||||||||||||
Sbjct: 66 caagatcagtgcaatccctttggaat 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 actccaaagggatcgcattgatct 35
||||||||||||||||||||||||
Sbjct: 1 actccaaagggatcgcattgatct 24
>55063_zma-miR393g:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 caagatcagtgcaatccctttgga 110
||||||||||||||||||||||||
Sbjct: 64 caagatcagtgcaatccctttgga 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatct 35
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>51723_ptc-miR393d:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatct 35
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatct 32
>51722_ptc-miR393c:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatct 35
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatct 32
>48501_ghr-miR393:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatct 35
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>55062_zma-miR393f:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>55057_zma-miR393a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>54850_vvi-miR393b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>54849_vvi-miR393a:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>54470_sbi-miR393:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>53841_ptc-miRf12019-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatc 37
>53840_ptc-miRf12018-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52949_ptc-miRf11127-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52948_ptc-miRf11126-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>52374_ptc-miRf10552-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatc 34
>51972_ptc-miRf10150-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 82 tccaaagggatcgcattgatc 62
>51950_ptc-miRf10128-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatc 37
>51721_ptc-miR393b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>51720_ptc-miR393a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48917_osa-miR393:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48731_mtr-miR393b:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
>48730_mtr-miR393:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>48576_gma-miR393:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48373_bna-miR393:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>47287_ath-miRf10187-akr:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 12 tccaaagggatcgcattgatc 32
>47214_ath-miRf10114-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 10 tccaaagggatcgcattgatc 30
>46999_ath-miR393b:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>46998_ath-miR393a:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tccaaagggatcgcattgatc 34
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
