miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48322_bdi-miR1135:pmrd
          Length = 138

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                       
Query: 35  ttgtcaaaatattacatgtatctagaccctttttaggcatagatacatccatatttggac 94
           ||||| ||||||||||||||||||||| | |||||  ||||||||||||| ||||||| |
Sbjct: 109 ttgtcgaaatattacatgtatctagacacgttttacacatagatacatccgtatttgggc 50

                              
Query: 95  aaatttgagacaattaata 113
           ||||||||||||| |||||
Sbjct: 49  aaatttgagacaagtaata 31




>48320_bdi-miR1122:pmrd
          Length = 180

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 60/67 (89%), Gaps = 2/67 (2%)
 Strand = Plus / Plus

                                                                       
Query: 41  aaatattacatgt--atctagaccctttttaggcatagatacatccatatttggacaaat 98
           |||||||||||||  ||||||||  ||||||  ||||||||||||| |||||||||||||
Sbjct: 29  aaatattacatgtgtatctagacgttttttacacatagatacatccgtatttggacaaat 88

                  
Query: 99  ttgagac 105
           |||||||
Sbjct: 89  ttgagac 95




>54757_tmo-miR1122:pmrd
          Length = 180

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 77  atacatccatatttggacaaatttgagacaattaatatgggacggagggagta 129
           |||||||||||||| ||||||||| ||||||  | | ||||||||||||||||
Sbjct: 78  atacatccatatttagacaaatttaagacaacaattttgggacggagggagta 26




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 74  tagatacatccatatttggacaaatttgagacaattaatatgggacggagggagtatt 131
           ||||||||||| ||||| ||||||| |  |||||  | | ||||||||||||||||||
Sbjct: 83  tagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagtatt 26




>48414_bsy-miR1122:pmrd
          Length = 181

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 74  tagatacatccatatttggacaaatttgagaca 106
           |||||||||||| |||| |||||| ||||||||
Sbjct: 81  tagatacatccaaattttgacaaacttgagaca 49