miRNEST 2.0, an integrative microRNA resource :: BLAST
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 75.8 bits (38), Expect = 5e-15
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccacaagtaaataccgatctcattatgaaatcggacactagt 71
||||||||||||||||||||||||| ||| | |||| | || |||||| |||||||
Sbjct: 5 tgcctggctccctgtatgccacaagaaaacatcgatttagtttcaaaatcgatcactagt 64
Query: 72 ggcgtacagagtagtcaagcat 93
||||||||||||||||||||||
Sbjct: 65 ggcgtacagagtagtcaagcat 86
>46935_ath-miR160b:pmrd
Length = 89
Score = 75.8 bits (38), Expect = 5e-15
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccacaagtaaataccgatctcattatgaaatcggacactagt 71
||||||||||||||||||||||||| ||| | |||| | || |||||| |||||||
Sbjct: 5 tgcctggctccctgtatgccacaagaaaacatcgatttagtttcaaaatcgatcactagt 64
Query: 72 ggcgtacagagtagtcaagcat 93
||||||||||||||||||||||
Sbjct: 65 ggcgtacagagtagtcaagcat 86
>51608_ptc-miR160a:pmrd
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccacaagtaaataccgatct 49
|||||||||||||||||||||||||| ||| ||| ||||
Sbjct: 10 atgcctggctccctgtatgccacaagcaaagaccaatct 48
>46936_ath-miR160c:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccacaagtaaataccgat 47
||||||||||||||||||||||| ||| ||||||||
Sbjct: 4 atgcctggctccctgtatgccacgagtggataccgat 40
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccaca 34
||||||||||||||||||||||||
Sbjct: 11 atgcctggctccctgtatgccaca 34
>51611_ptc-miR160d:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccaca 34
||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccaca 33
>54947_zma-miR160m:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>54946_zma-miR160i:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgccac 23
>54945_zma-miR160h:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>54944_zma-miR160g:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>54942_zma-miR160e:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 8 atgcctggctccctgtatgccac 30
>54941_zma-miR160d:pmrd
Length = 142
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 20 atgcctggctccctgtatgccac 42
>54939_zma-miR160b:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccaca 43
>54938_zma-miR160a:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccaca 32
>54781_vvi-miR160d:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 catgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 9 catgcctggctccctgtatgcca 31
>54780_vvi-miR160c:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
>54675_tae-miR160:pmrd
Length = 148
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 21 atgcctggctccctgtatgccac 43
>54405_sbi-miR160b:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>54404_sbi-miR160a:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>51334_pga-miR160:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>48829_osa-miR160d:pmrd
Length = 142
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 7 atgcctggctccctgtatgccac 29
>48826_osa-miR160a:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccaca 34
|||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccaca 26
>54940_zma-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccac 28
>54783_vvi-miR160f:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54575_smo-miR160b:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>54541_sly-miR160a:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 19 atgcctggctccctgtatgcca 40
>54408_sbi-miR160e:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54407_sbi-miR160d:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54406_sbi-miR160c:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>51364_ppt-miR160f:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51363_ppt-miR160e:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>48833_osa-miR160n:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>48832_osa-miR160m:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>48828_osa-miR160c:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccac 28
>48827_osa-miR160b:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>48791_oba-miR160:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccac 25
>48658_hvv-miR160a:pmrd
Length = 344
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 323 atgcctggctccctgtatgcca 344
>48635_gra-miR160b:pmrd
Length = 293
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 catgcctggctccctgtatgcc 31
||||||||||||||||||||||
Sbjct: 271 catgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 catgcctggctccctgtatgcc 31
||||||||||||||||||||||
Sbjct: 84 catgcctggctccctgtatgcc 105
>48397_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 25 atgcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 25 atgcctggctccctgtatgcca 46
>48306_bdi-miR160:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 catgcctggctccctgtatgcc 31
||||||||||||||||||||||
Sbjct: 16 catgcctggctccctgtatgcc 37
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 3 atgcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 3 atgcctggctccctgtatgcca 24
>54943_zma-miR160f:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcc 31
|||||||||||||||||||||
Sbjct: 20 atgcctggctccctgtatgcc 40
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51610_ptc-miR160c:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgtatgccac 33
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48830_osa-miR160e:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcc 31
|||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcc 30
>48704_mtr-miR160e:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>48542_gma-miR160a:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>46865_aqc-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
