miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48322_bdi-miR1135:pmrd
          Length = 138

 Score = 77.8 bits (39), Expect = 2e-15
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 38  tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagatacatgtaat 97
           ||||||||||| ||||||| | ||||||||||   | ||| |||||||||||||||||||
Sbjct: 40  tctcaaatttgcccaaatacggatgtatctatgtgtaaaacgtgtctagatacatgtaat 99

                      
Query: 98  atttcgacaag 108
           |||||||||||
Sbjct: 100 atttcgacaag 110




>54757_tmo-miR1122:pmrd
          Length = 180

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                               
Query: 13 tactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtat 65
          |||||||||||| ||| |||| || ||| ||||||||| ||||||| ||||||
Sbjct: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78




>48320_bdi-miR1122:pmrd
          Length = 180

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 58/68 (85%), Gaps = 2/68 (2%)
 Strand = Plus / Minus

                                                                       
Query: 38  tctcaaatttgtccaaatatgaatgtatctattcctgaaaagtgtctagat--acatgta 95
           ||||||||||||||||||| | ||||||||||   | ||||  ||||||||  |||||||
Sbjct: 94  tctcaaatttgtccaaatacggatgtatctatgtgtaaaaaacgtctagatacacatgta 35

                   
Query: 96  atatttcg 103
           ||||||||
Sbjct: 34  atatttcg 27




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                    
Query: 11 aatactccctccgttccataattcttctctcaaatttgtccaaatatgaatgtatcta 68
          |||||||||||||| ||| ||||||| ||  | ||||||| ||||| | |||||||||
Sbjct: 26 aatactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatcta 83