miRNEST 2.0, an integrative microRNA resource :: BLAST
>48319_bdi-miR444:pmrd
Length = 110
Score = 218 bits (110), Expect = 7e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 2 cacgcgtccgactagaggcagcaactccataacttgcggaaagcttgttggatgatgacc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacgcgtccgactagaggcagcaactccataacttgcggaaagcttgttggatgatgacc 60
Query: 62 atgccaatgattttaccgaagttatgcagttgctgcctcaagcttgctgc 111
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgccaatgattttaccgaagttatgcagttgctgcctcaagcttgctgc 110
>49006_osa-miR444e:pmrd
Length = 140
Score = 115 bits (58), Expect = 7e-27
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 13 ctagaggcagcaactccataacttgcggaaagcttgttggatgatgaccatgccaatgat 72
||||||||| ||||| ||||||||||| || ||||||||||||||| | ||||||||||
Sbjct: 25 ctagaggcaccaactgcataacttgcgagaaacttgttggatgatgatcttgccaatgat 84
Query: 73 tttaccg-aagttatgcagttgctgcctcaagcttgctgcct 113
||| ||| ||||||||||||||||||||||||||| ||||||
Sbjct: 85 tttgccgcaagttatgcagttgctgcctcaagcttactgcct 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 16 gaggcagcaactccataacttgcgg 40
|||||||||||| ||||||||||||
Sbjct: 113 gaggcagcaactgcataacttgcgg 89
>54691_tae-miR444:pmrd
Length = 426
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 80 aagttatgcagttgctgcctcaagcttgctgcctccc 116
|||| ||||||||||||||||||||||||||||||||
Sbjct: 142 aagtcatgcagttgctgcctcaagcttgctgcctccc 178
>54743_tae-miR2024b:pmrd
Length = 142
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 80 aagttatgcagttgctgcctcaagcttgctgcctcc 115
|||| |||||||||||||||||||||||||||||||
Sbjct: 107 aagtcatgcagttgctgcctcaagcttgctgcctcc 142
>49007_osa-miR444f:pmrd
Length = 154
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 80 aagttatgcagttgctgcctcaagcttgctgcctcc 115
||||| |||||||| |||||||||||||||||||||
Sbjct: 118 aagttgtgcagttgttgcctcaagcttgctgcctcc 153
>48798_oru-miR444:pmrd
Length = 165
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 80 aagttatgcagttgctgcctcaagcttgctgcctcc 115
||||| |||||||| |||||||||||||||||||||
Sbjct: 123 aagttgtgcagttgttgcctcaagcttgctgcctcc 158
>55114_zma-miR444a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 91 ttgctgcctcaagcttgctgcctccc 116
||||||||||||||||||||||||||
Sbjct: 1 ttgctgcctcaagcttgctgcctccc 26
>54376_pvi-miR444:pmrd
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 80 aagttatgcagttgctgcctcaagcttgctgcctccc 116
||||| |||||||| || |||||||||||||||||||
Sbjct: 85 aagttgtgcagttgttgtctcaagcttgctgcctccc 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 84 tatgcagttgctgcctcaagcttg 107
||||||||||||||||| ||||||
Sbjct: 38 tatgcagttgctgcctctagcttg 15
>54742_tae-miR2024a:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 80 aagttatgcagttgctgcctcaagcttgctgcctcc 115
||||| ||||||||||| ||||||||||||| ||||
Sbjct: 83 aagttgtgcagttgctgtctcaagcttgctgactcc 118
>55115_zma-miR444b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 ttgctgcctcaagcttgctgcctccc 116
|||||||||||||||| |||||||||
Sbjct: 1 ttgctgcctcaagcttcctgcctccc 26
