miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48394_bra-miR158:pmrd
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 7 acgttatatctgttcttctttgtctatcgtttggaaaagattgatgacgctatctacact 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgttatatctgttcttctttgtctatcgtttggaaaagattgatgacgctatctacact 60
Query: 67 tttccaaatgtagacaaagcaaaaccgtgatgacgt 102
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttccaaatgtagacaaagcaaaaccgtgatgacgt 96
>48385_bol-miR158:pmrd
Length = 97
Score = 71.9 bits (36), Expect = 9e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 63 cacttttccaaatgtagacaaagcaaaaccgtgatgacgt 102
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 58 cactttcccaaatgtagacaaagcaaaaccgtgatgacgt 97
>46929_ath-miR158a:pmrd
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 65 cttttccaaatgtagacaaagcaaaaccgtgatgacgtcgt 105
|||| ||||||||||||||||||| |||||||||| |||||
Sbjct: 60 ctttcccaaatgtagacaaagcaataccgtgatgatgtcgt 100
>46930_ath-miR158b:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 ccaaatgtagacaaagcaaaaccgtgat 97
||||||||||||||||||| ||||||||
Sbjct: 58 ccaaatgtagacaaagcaataccgtgat 85
>54539_sly-miR158b:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tccaaatgtagacaaagcaa 88
||||||||||||||||||||
Sbjct: 55 tccaaatgtagacaaagcaa 74
>54538_sly-miR158a:pmrd
Length = 50
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tccaaatgtagacaaagcaa 88
||||||||||||||||||||
Sbjct: 31 tccaaatgtagacaaagcaa 50
