miRNEST 2.0, an integrative microRNA resource :: BLAST
>47013_ath-miR398b:pmrd
Length = 116
Score = 115 bits (58), Expect = 8e-27
Identities = 101/114 (88%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 5 ggatctcgacagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccaca 64
||||||||||||||| |||||||||||||| | | ||||||||||||||||||||| ||
Sbjct: 2 ggatctcgacagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctacg 61
Query: 65 tcattataacacatctgtcttttcatgtgttctcaggtcacccctgctgagctc 118
||||| | ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 tcattgttacagctct-cgttttcatgtgttctcaggtcacccctgctgagctc 114
>47014_ath-miR398c:pmrd
Length = 115
Score = 109 bits (55), Expect = 5e-25
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 5 ggatctcgacagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccaca 64
||||||||||||||| |||||||||||||| | ||||||||||||| ||| ||||| ||
Sbjct: 2 ggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctacg 61
Query: 65 tcattataacacatctgtcttttcatgtgttctcaggtcacccctgctgagctc 118
||||| | ||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 62 tcattgt--tacagctctcgtttcatgtgttctcaggtcacccctgctgagctc 113
>54876_vvi-miR398c:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 tcatgtgttctcaggtcacccctgctg 113
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>54875_vvi-miR398b:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 tcatgtgttctcaggtcacccctgctg 113
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>51745_ptc-miR398b:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 86 ttcatgtgttctcaggtcacccctgc 111
|||||||||||||||||| |||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctgc 77
>54874_vvi-miR398a:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>52988_ptc-miRf11166-akr:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>51746_ptc-miR398c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 88 catgtgttctcaggtcacccctgc 111
|||||||||||||||| |||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>51744_ptc-miR398a:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccct 99
>48962_osa-miR398a:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>48749_mtr-miR398a:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 87 tcatgtgttctcaggtcacccctg 110
||||||||||||||||| ||||||
Sbjct: 54 tcatgtgttctcaggtcgcccctg 77
>48582_gma-miR398b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 96 tgtgttctcaggtcacccct 115
>48581_gma-miR398a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>48511_ghr-miR398:pmrd
Length = 67
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcacccct 66
>48391_bol-miR398a:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>48390_bol-miR398a:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>47012_ath-miR398a:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>46890_aqc-miR398b:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 88 catgtgttctcaggtcacccctgc 111
|||||||||||||||| |||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>46889_aqc-miR398a:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 tgtgttctcaggtcacccct 109
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
