miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47820_ath-miRf10720-akr:pmrd
          Length = 127

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 1   ctagattttaacccgcggtataccgcggg 29
           |||||||||||||||||||||||||||||
Sbjct: 91  ctagattttaacccgcggtataccgcggg 119



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 176 ctagatattaacctgcggtataccgcgggcttatatttt 214
           ||||||||||||| | |||||||||||||| ||||||||
Sbjct: 39  ctagatattaacccgtggtataccgcgggcctatatttt 1



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                 
Query: 1  ctagattttaacccgcggtataccgcgggtctatatttt 39
          |||||| |||||||| ||||||||||||| |||||||||
Sbjct: 39 ctagatattaacccgtggtataccgcgggcctatatttt 1



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 176 ctagatattaacctgcggtataccgcggg 204
           |||||| |||||| |||||||||||||||
Sbjct: 91  ctagattttaacccgcggtataccgcggg 119