miRNEST 2.0, an integrative microRNA resource :: BLAST
>47269_ath-miRf10169-akr:pmrd
Length = 253
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 3 tggtggtactcggcttggtggtagagtgatcgagtgaaggtgatgaaggtactcgaccac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tggtggtactcggcttggtggtagagtgatcgagtgaaggtgatgaaggtactcgaccat 136
Query: 63 gtggttgagtagtgtgatc 81
||||| |||||||||||||
Sbjct: 137 gtggtcgagtagtgtgatc 155
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgat 46
|||| |||||||||||||||||||
Sbjct: 145 gtagtgtgatcgagtgaaggtgat 168
>47189_ath-miRf10089-akr:pmrd
Length = 172
Score = 103 bits (52), Expect = 2e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 30 gatcgagtgaaggtgatgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcgagtgaaggtgatgaaggtactcgaccacgtggttgagtagtgtgatc 52
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgatg 47
|||| ||||||||||||||||||||
Sbjct: 42 gtagtgtgatcgagtgaaggtgatg 66
>47308_ath-miRf10208-akr:pmrd
Length = 178
Score = 89.7 bits (45), Expect = 3e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 3 tggtggtactcggcttggtggtagagtgatcgagtgaaggtgatg 47
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 tggtggtactcggcttggtggtagagtgatcgagtgaaggtgatg 90
>47307_ath-miRf10207-akr:pmrd
Length = 178
Score = 89.7 bits (45), Expect = 3e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 3 tggtggtactcggcttggtggtagagtgatcgagtgaaggtgatg 47
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 tggtggtactcggcttggtggtagagtgatcgagtgaaggtgatg 90
>47188_ath-miRf10088-akr:pmrd
Length = 143
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 45 atgaaggtactcgaccacgtggttgagtagtgtgatc 81
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaaggtactcgaccacgtggttgagtagtgtgatc 37
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgatg 47
|||| ||||||||||||||||||||
Sbjct: 27 gtagtgtgatcgagtgaaggtgatg 51
>47835_ath-miRf10735-akr:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 47 gaaggtactcgaccacgtggttgagtagtgtgatc 81
|||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaggtactcgaccacgtggttgagtagtgtgatc 35
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgatg 47
|||| ||||||||||||||||||||
Sbjct: 25 gtagtgtgatcgagtgaaggtgatg 49
>47272_ath-miRf10172-akr:pmrd
Length = 143
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 45 atgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||||||||||||||| |||||||||||||||||||
Sbjct: 1 atgaaggtactcgaccatgtggttgagtagtgtgatc 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgat 46
|||| |||||||||||||||||||
Sbjct: 27 gtagtgtgatcgagtgaaggtgat 50
>47271_ath-miRf10171-akr:pmrd
Length = 143
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 45 atgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||||||||||||||| |||||||||||||||||||
Sbjct: 1 atgaaggtactcgaccatgtggttgagtagtgtgatc 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgat 46
|||| |||||||||||||||||||
Sbjct: 27 gtagtgtgatcgagtgaaggtgat 50
>47903_ath-miRf10803-akr:pmrd
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 3 tggtggtactcggcttggtggtagagtgatcg 34
||||||||||||||||||||||||||||||||
Sbjct: 82 tggtggtactcggcttggtggtagagtgatcg 113
>47268_ath-miRf10168-akr:pmrd
Length = 143
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 45 atgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||||||||||||||| ||||| |||||||||||||
Sbjct: 1 atgaaggtactcgaccatgtggtcgagtagtgtgatc 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgat 46
|||| |||||||||||||||||||
Sbjct: 27 gtagtgtgatcgagtgaaggtgat 50
>47139_ath-miRf10039-akr:pmrd
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 43 tgatgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 1 tgatgaaggtactcgaccatgtggtcgagtagggtgatc 39
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgatg 47
|||| ||||||||||||||||||||
Sbjct: 29 gtagggtgatcgagtgaaggtgatg 53
>47270_ath-miRf10170-akr:pmrd
Length = 183
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 48 aaggtactcgaccacgtggttgagtagtgtgatc 81
|||||||||||||| ||||| |||||||||||||
Sbjct: 1 aaggtactcgaccatgtggtcgagtagtgtgatc 34
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gtagagtgatcgagtgaaggtgat 46
|||| |||||||||||||||||||
Sbjct: 24 gtagtgtgatcgagtgaaggtgat 47
>48102_ath-miRf11002-akr:pmrd
Length = 153
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 tggtggtactcggcttggtggtagagtgat 32
|||| ||||||| |||||||||||||||||
Sbjct: 5 tggtagtactcgacttggtggtagagtgat 34
>48229_ath-miRf11129-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 32 tcgagtgaaggtgatgaaggtactcgaccacgtggttgagt 72
||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 32 tcgagtggtggtgatgagggcactcgaccacgtggtcgagt 72
>47941_ath-miRf10841-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 32 tcgagtgaaggtgatgaaggtactcgaccacgtggttgagt 72
||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 97 tcgagtggtggtgatgagggcactcgaccacgtggtcgagt 57
>47650_ath-miRf10550-akr:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 32 tcgagtgaaggtgatgaaggtactcgaccacgtggttgagt 72
||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 31 tcgagtggtggtgatgagggcactcgaccacgtggtcgagt 71
>47649_ath-miRf10549-akr:pmrd
Length = 222
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 32 tcgagtgaaggtgatgaaggtactcgaccacgtggttgagt 72
||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 83 tcgagtggtggtgatgagggcactcgaccacgtggtcgagt 123
>47648_ath-miRf10548-akr:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 32 tcgagtgaaggtgatgaaggtactcgaccacgtggttgagt 72
||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 168 tcgagtggtggtgatgagggcactcgaccacgtggtcgagt 208
>47647_ath-miRf10547-akr:pmrd
Length = 222
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 32 tcgagtgaaggtgatgaaggtactcgaccacgtggttgagt 72
||||||| |||||||| || ||||||||||||||| ||||
Sbjct: 83 tcgagtggtggtgatgagggcactcgaccacgtggtcgagt 123
>47294_ath-miRf10194-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 42 gtgatgaaggtactcgaccacgtggttgagtagtgtgatc 81
|||||| ||||||||||||| | ||| |||| ||||||||
Sbjct: 1 gtgatggaggtactcgaccaaggggtcgagtggtgtgatc 40
>47293_ath-miRf10193-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 42 gtgatgaaggtactcgaccacgtggttgagtagtgtgatc 81
|||||| ||||||||||||| | ||| |||| ||||||||
Sbjct: 3 gtgatggaggtactcgaccaaggggtcgagtggtgtgatc 42
>47312_ath-miRf10212-akr:pmrd
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 43 tgatgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||| ||||||||||||| ||||| |||| |||||||
Sbjct: 1 tgatgtaggtactcgaccatgtggtcgagtgatgtgatc 39
>47311_ath-miRf10211-akr:pmrd
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 43 tgatgaaggtactcgaccacgtggttgagtagtgtgatc 81
||||| ||||||||||||| ||||| |||| |||||||
Sbjct: 1 tgatgtaggtactcgaccatgtggtcgagtgatgtgatc 39
