miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48589_gma-miR1507b:pmrd
Length = 98
Score = 186 bits (94), Expect = 3e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 25 gtttgacagagatgtatggagtgagagaagggaaatgatattttccgatcccatcgttac 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttgacagagatgtatggagtgagagaagggaaatgatattttccgatcccatcgttac 60
Query: 85 tctctttcctctctcattccatacatcgtctgacgaac 122
|||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tctcttccctctctcattccatacatcgtctgacgaac 98
>48588_gma-miR1507a:pmrd
Length = 107
Score = 133 bits (67), Expect = 4e-32
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 24 tgtttgacagagatgtatggagtgagagaagggaaatgatattttccgatcccatcgtta 83
|||||| ||||| ||||||||||||||||||||||| | ||||||||||| | ||||||
Sbjct: 4 tgtttggcagaggtgtatggagtgagagaagggaaagggtattttccgattctgtcgtta 63
Query: 84 ctctctttcctctctcattccatacatcgtctgacgaac 122
||||||| |||||||||||||||||||||||||||||||
Sbjct: 64 ctctcttccctctctcattccatacatcgtctgacgaac 102
>54764_vun-miR1507b:pmrd
Length = 109
Score = 85.7 bits (43), Expect = 8e-18
Identities = 89/103 (86%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 26 tttgacagagatgtatggagtgagagaagggaaatgatattttcc-gatcccatcgttac 84
|||| ||||| ||||||||||||||||||||||| ||||| |||| ||||| | |
Sbjct: 7 tttggcagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttc 66
Query: 85 tctctttcctctctcattccatacatcgtctgacgaacctagc 127
| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 67 tttctttcctctctcattccatacatcgtctgacgaacgtagc 109
>54763_vun-miR1507a:pmrd
Length = 109
Score = 77.8 bits (39), Expect = 2e-15
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 26 tttgacagagatgtatggagtgagagaagggaaatgatatttt-ccgatcccatcgttac 84
|||| ||||| ||||||||||||||||||||||| ||| |||||| ||||| | |
Sbjct: 7 tttggcagaggtgtatggagtgagagaagggaaaaacgcctttgccgatctcatcggttc 66
Query: 85 tctctttcctctctcattccatacatcgtctgacgaacctagc 127
| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 67 tttttttcctctctcattccatacatcgtctgacgaacgtagc 109
