miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48597_gma-miR1514a:pmrd
Length = 99
Score = 196 bits (99), Expect = 6e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 82 ctttgctattttcatttttaaaataggcattggggtcccttcttgttcctccttttcctt 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgctattttcatttttaaaataggcattggggtcccttcttgttcctccttttcctt 60
Query: 142 tcctatcccaatgcctattttaaaatgaaaacaacgata 180
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctatcccaatgcctattttaaaatgaaaacaacgata 99
>54384_pvu-miR1514a:pmrd
Length = 202
Score = 105 bits (53), Expect = 2e-23
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 149 ccaatgcctattttaaaatgaaaacaacgatacactgttttcgtttgaaactattgttaa 208
|||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||| ||
Sbjct: 114 ccaatgcctattttaagatgaaaacaaggatacactgtttttgtttgaaactgttgtgaa 173
Query: 209 ggaagataacgctgacgagttcttcaatt 237
||||||||| || ||||||||||||||
Sbjct: 174 ggaagataagactcccgagttcttcaatt 202
>48598_gma-miR1514b:pmrd
Length = 109
Score = 63.9 bits (32), Expect = 6e-11
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 82 ctttgctattttcatttttaaaataggcattggggtcccttcttgttcctcctttt 137
|||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||
Sbjct: 1 ctttgctattttcatttttaaaatagacattgggct-tcttcttgttcctcttttt 55
