miRNEST 2.0, an integrative microRNA resource :: BLAST
>48604_gma-miR1520a:pmrd
Length = 150
Score = 81.8 bits (41), Expect = 5e-16
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 215 tggatgttaattccataaaagatgaaatacattgttgttttcattgacccatcaaaacat 274
||||||| || ||||||||||||||||| ||||||| |||||||||||| |||| |||||
Sbjct: 115 tggatgtcaactccataaaagatgaaatgcattgttattttcattgaccaatcagaacat 56
Query: 275 gacac 279
|||||
Sbjct: 55 gacac 51
>48607_gma-miR1520d:pmrd
Length = 111
Score = 65.9 bits (33), Expect = 3e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 239 aaatacattgttgttttcattgacccatcaaaacatgacacgtga 283
||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct: 54 aaatacattgttgttttcattgatcaatcagaacatgacacgtga 98
>48605_gma-miR1520b:pmrd
Length = 129
Score = 63.9 bits (32), Expect = 1e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 245 attgttgttttcattgacccatcaaaacatgacacgtgaaagtcatcattcaataaaaaa 304
||||||||| |||||| | |||| |||||||||||| | |||||||||||||||| ||
Sbjct: 68 attgttgttgtcattggtcgatcagaacatgacacgtaatagtcatcattcaataagaac 9
Query: 305 gtgacacg 312
||||||||
Sbjct: 8 gtgacacg 1
Score = 52.0 bits (26), Expect = 4e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 265 atcaaaacatgacacgtgaaagtcatcattcaataaaaaagtgaca 310
|||| |||||||||||||| |||||||||| ||||| || ||||||
Sbjct: 82 atcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
Score = 42.1 bits (21), Expect = 4e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 175 gtgtcactttcttattgaatgatga 199
||||||| |||||||||||||||||
Sbjct: 2 gtgtcacgttcttattgaatgatga 26
>48606_gma-miR1520c:pmrd
Length = 140
Score = 56.0 bits (28), Expect = 3e-08
Identities = 101/126 (80%), Gaps = 7/126 (5%)
Strand = Plus / Minus
Query: 175 gtgtcactttcttattgaatgatgattgtcacgtatcatg-------tggatgttaattc 227
||||||| |||||||||||||||| |||||| || ||||| ||||||| || ||
Sbjct: 126 gtgtcacgttcttattgaatgatgtttgtcatgtgtcatgttctgattggatgtcaactc 67
Query: 228 cataaaagatgaaatacattgttgttttcattgacccatcaaaacatgacacgtgaaagt 287
||||||| || |||| ||| || |||| ||||| | |||| || ||||||||||| |||
Sbjct: 66 cataaaaaataaaatgtattattatttttattgatcaatcagaatatgacacgtgacagt 7
Query: 288 catcat 293
||||||
Sbjct: 6 catcat 1
Score = 50.1 bits (25), Expect = 2e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 265 atcaaaacatgacacgtgaaagtcatcattcaataaaaaagtgacacgtgaca 317
|||| |||||||||| ||| | ||||||||||||| || |||||||||||||
Sbjct: 80 atcagaacatgacacatgacaaacatcattcaataagaacgtgacacgtgaca 132
