miRNEST 2.0, an integrative microRNA resource :: BLAST
>48750_mtr-miR399a:pmrd
Length = 134
Score = 85.7 bits (43), Expect = 7e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 72 tttcttaatgtgcaatctgccaaaggagatttgcccagcgattctcc 118
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tttcttagtgtgcaatctgccaaaggagatttgcccagcgattctcc 124
>48754_mtr-miR399e:pmrd
Length = 134
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 75 cttaatgtgcaatctgccaaaggagatttgcccagcgattctc 117
|||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 81 cttagtgtgtaatctgccaaaggagatttgcccagcgattctc 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 7 attacagggcaagttctccattggcaggtagc 38
||||||||| |||||||||||||||||||||
Sbjct: 17 attacagggtgagttctccattggcaggtagc 48
>48970_osa-miR399g:pmrd
Length = 119
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 86 atctgccaaaggagatttgcccagcgattc 115
||||||||||||||||||||||||||||||
Sbjct: 86 atctgccaaaggagatttgcccagcgattc 115
>51756_ptc-miR399j:pmrd
Length = 112
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcaggtagccacta 43
|||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 tgcattacagggcaagacctccattggcaggcagccacta 40
>54494_sbi-miR399f:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagc 110
||||||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgcccagc 102
>48969_osa-miR399f:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagc 110
||||||||||||||||||||||||
Sbjct: 85 tctgccaaaggagatttgcccagc 108
>54493_sbi-miR399e:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgcccagc 110
|||||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagc 108
>49373_osa-miRf10158-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgcccagc 110
|||||||||||||||||||||||
Sbjct: 84 ctgccaaaggagatttgcccagc 106
>48968_osa-miR399e:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgcccagc 110
|||||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgcccagc 109
>54881_vvi-miR399e:pmrd
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagcgattct 116
||||||||||||||||||||| || |||||
Sbjct: 80 tctgccaaaggagatttgcccggcaattct 109
>47020_ath-miR399f:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcag 33
|||||||||||||||| || ||||||||||
Sbjct: 4 tgcattacagggcaagatcaccattggcag 33
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 86 tctgccaaaggagatttgccc 106
>47015_ath-miR399a:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 atctgccaaaggagatttgccc 107
||||||||||||||||||||||
Sbjct: 90 atctgccaaaggagatttgccc 111
>48377_bna-miR399:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgccc 99
>47535_ath-miRf10435-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 64 tctgccaaaggagatttgccc 84
>47018_ath-miR399d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 68 tctgccaaaggagatttgccc 88
>55093_zma-miR399c:pmrd
Length = 207
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
|||||||||||| |||||| ||||||||
Sbjct: 168 tgccaaaggagaattgccctgcgattct 195
>54883_vvi-miR399g:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>54491_sbi-miR399c:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
|||||||||||| |||||| ||||||||
Sbjct: 91 tgccaaaggagaattgccctgcgattct 118
>51749_ptc-miR399c:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcaggtagccacta 43
|||||||||||||||| | |||||||||| | ||||||||
Sbjct: 9 tgcattacagggcaagct-tccattggcatgcagccacta 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
||||||||||||||||||| || |||||
Sbjct: 97 tgccaaaggagatttgcccggcaattct 124
>51748_ptc-miR399b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcaggtagccacta 43
|||||||||||||||| | |||||||||| | ||||||||
Sbjct: 9 tgcattacagggcaagct-tccattggcatgcagccacta 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
||||||||||||||||||| || |||||
Sbjct: 97 tgccaaaggagatttgcccggcaattct 124
>51747_ptc-miR399a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>47019_ath-miR399e:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcc 106
||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcc 96
