miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48584_gma-miR408a:pmrd
          Length = 120

 Score =  123 bits (62), Expect = 5e-29
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                       
Query: 41  gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgaa 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgaa 60

             
Query: 101 ag 102
           ||
Sbjct: 61  ag 62




>51397_ppt-miR408b:pmrd
          Length = 144

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 136 ctcatgcactgcctctttcctggcttc 162
           ||||||||||||||||| |||||||||
Sbjct: 90  ctcatgcactgcctcttccctggcttc 116




>51347_ppe-miR408:pmrd
          Length = 105

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggct 160
           |||||||||||   ||||||||||||||||| |||||||
Sbjct: 58  ctgttgtggctctactcatgcactgcctcttccctggct 96




>54389_rco-miR408:pmrd
          Length = 129

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                           
Query: 34 gacaaaggctgggaacaggcagggcacgaatggagctatcaacagaaaa 82
          ||||||| |||||||||||||| ||| | |||| ||||  |||||||||
Sbjct: 21 gacaaagactgggaacaggcagtgcatggatggggctactaacagaaaa 69




>51762_ptc-miR408:pmrd
          Length = 105

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 138 catgcactgcctctttcctggctt 161
           ||||||||||||||| ||||||||
Sbjct: 75  catgcactgcctcttccctggctt 98




>48428_cpt-miR408:pmrd
          Length = 100

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 121 tctgttgtggctacgctcatgcactgcctctttcctggct 160
           |||||| ||||| | | ||||||||||||||| |||||||
Sbjct: 52  tctgttttggctcctcccatgcactgcctcttccctggct 91