miRNEST 2.0, an integrative microRNA resource :: BLAST
>54892_vvi-miR408:pmrd
Length = 107
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 120 catgcactgcctcttccctggctctgtctc 149
||||||||||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggctctgtctc 105
>51347_ppe-miR408:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 105 tgttgtggttctgctcatgcactgcctcttccctggct 142
|||||||| ||| |||||||||||||||||||||||||
Sbjct: 59 tgttgtggctctactcatgcactgcctcttccctggct 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 34 gggaacaggcagagcatggatggag 58
||||||||| |||||||||||||||
Sbjct: 13 gggaacaggtagagcatggatggag 37
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 33 ggggaacaggcagagcatggatggagcta 61
|||||||||||||||||||||||||||||
Sbjct: 2 ggggaacaggcagagcatggatggagcta 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 catgcactgcctcttccctg 139
||||||||||||||||||||
Sbjct: 60 catgcactgcctcttccctg 79
>51762_ptc-miR408:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 33 ggggaacaggcagagcatggatggagcta 61
|||||||||||||||||||||||||||||
Sbjct: 17 ggggaacaggcagagcatggatggagcta 45
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 catgcactgcctcttccctggct 142
|||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggct 97
>51397_ppt-miR408b:pmrd
Length = 144
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 118 ctcatgcactgcctcttccctggct 142
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>48428_cpt-miR408:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 33 ggggaacaggcagagcatggatgga 57
|||||||||||||||||||||||||
Sbjct: 12 ggggaacaggcagagcatggatgga 36
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 catgcactgcctcttccctggctct 144
|||||||||||||||||||||||||
Sbjct: 69 catgcactgcctcttccctggctct 93
>48584_gma-miR408a:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 86 gagagtgagaggagaaatatgttgtggttctgctcatgcactgcctcttccctggc 141
||||| ||||| ||| || |||||||| | ||||||||||||||| |||||||||
Sbjct: 65 gagagagagagaagagatctgttgtggctacgctcatgcactgcctgttccctggc 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 34 gggaacaggcagagcatggatggagctatcaaca 67
|||||||||||| ||| | |||||||||||||||
Sbjct: 4 gggaacaggcagggcacgaatggagctatcaaca 37
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 120 catgcactgcctcttccctggctc 143
||||||||||||||||||||||||
Sbjct: 27 catgcactgcctcttccctggctc 4
>47031_ath-miR408:pmrd
Length = 218
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 120 catgcactgcctcttccctggctc 143
||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctc 142
>51566_pta-miR408:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 121 atgcactgcctcttccctggctc 143
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 120 catgcactgcctcttccctggct 142
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>55104_zma-miR408:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174
>54690_tae-miR408:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158
>54649_sof-miR408d:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198
>54648_sof-miR408c:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54647_sof-miR408b:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54646_sof-miR408a:pmrd
Length = 283
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 121 atgcactgcctcttccctggct 142
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>48975_osa-miR408:pmrd
Length = 213
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggctc 143
||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggct 142
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>54389_rco-miR408:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 122 tgcactgcctcttccctggct 142
|||||||||||||||||||||
Sbjct: 91 tgcactgcctcttccctggct 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 34 gggaacaggcagagcatggatggagcta 61
|||||||||||| |||||||||| ||||
Sbjct: 31 gggaacaggcagtgcatggatggggcta 58
>48317_bdi-miR408:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 catgcactgcctcttccctgg 140
|||||||||||||||||||||
Sbjct: 68 catgcactgcctcttccctgg 88
