miRNEST 2.0, an integrative microRNA resource :: BLAST
>48584_gma-miR408a:pmrd
Length = 120
Score = 115 bits (58), Expect = 1e-26
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 33 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatg 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatg 58
>54892_vvi-miR408:pmrd
Length = 107
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggctctgtctct 160
|||||||||||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggctctgtctct 106
>51347_ppe-miR408:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggct 152
||||||||||| |||||||||||||||||||||||||
Sbjct: 58 ctgttgtggctctactcatgcactgcctcttccctggct 96
>48428_cpt-miR408:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 113 tctgttgtggctacgctcatgcactgcctcttccctggctct 154
|||||| ||||| | | |||||||||||||||||||||||||
Sbjct: 52 tctgttttggctcctcccatgcactgcctcttccctggctct 93
>51397_ppt-miR408b:pmrd
Length = 144
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 128 ctcatgcactgcctcttccctggct 152
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 130 catgcactgcctcttccctggctc 153
||||||||||||||||||||||||
Sbjct: 27 catgcactgcctcttccctggctc 4
>47031_ath-miR408:pmrd
Length = 218
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggctc 153
||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctc 142
>51762_ptc-miR408:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggct 152
|||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggct 97
>51566_pta-miR408:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 131 atgcactgcctcttccctggctc 153
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 130 catgcactgcctcttccctggct 152
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>55104_zma-miR408:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174
>54690_tae-miR408:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158
>54649_sof-miR408d:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198
>54648_sof-miR408c:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54647_sof-miR408b:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54646_sof-miR408a:pmrd
Length = 283
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 131 atgcactgcctcttccctggct 152
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>48975_osa-miR408:pmrd
Length = 213
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggctc 153
||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggct 152
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>54389_rco-miR408:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 26 gacaaaggctgggaacaggcagggcacgaatggagctatcaacagaaaa 74
||||||| |||||||||||||| ||| | |||| |||| |||||||||
Sbjct: 21 gacaaagactgggaacaggcagtgcatggatggggctactaacagaaaa 69
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 132 tgcactgcctcttccctggct 152
|||||||||||||||||||||
Sbjct: 91 tgcactgcctcttccctggct 111
>48317_bdi-miR408:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctgg 150
|||||||||||||||||||||
Sbjct: 68 catgcactgcctcttccctgg 88
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctg 149
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Sbjct: 60 catgcactgcctcttccctg 79
