miRNEST 2.0, an integrative microRNA resource :: BLAST
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 69.9 bits (35), Expect = 9e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 24 gtgagcaaggtggagaagcagggcacgtgtattactaactcat 66
||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 5 gtgagcaagatggagaagcagggcacgtgcattactaactcat 47
>51623_ptc-miR164e:pmrd
Length = 155
Score = 69.9 bits (35), Expect = 9e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 24 gtgagcaaggtggagaagcagggcacgtgtattactaactcat 66
||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 1 gtgagcaagatggagaagcagggcacgtgcattactaactcat 43
>51348_ppl-miR164:pmrd
Length = 159
Score = 69.9 bits (35), Expect = 9e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 24 gtgagcaaggtggagaagcagggcacgtgtattactaactcat 66
||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 1 gtgagcaagatggagaagcagggcacgtgcattactaactcat 43
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 24 gtgagcaaggtggagaagcagggcacgtgtattactaactcat 66
||||||||| ||||||||||||||||||| | |||||||||||
Sbjct: 5 gtgagcaagatggagaagcagggcacgtgcactactaactcat 47
>51620_ptc-miR164b:pmrd
Length = 162
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 24 gtgagcaaggtggagaagcagggcacgtgtattactaactcat 66
||||||||| ||||||||||||||||||| | |||||||||||
Sbjct: 1 gtgagcaagatggagaagcagggcacgtgcactactaactcat 43
>54787_vvi-miR164c:pmrd
Length = 97
Score = 60.0 bits (30), Expect = 9e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 25 tgagcaaggtggagaagcagggcacgtgtattactaactcat 66
|||||||| ||||||||||||||||||| ||||||| |||||
Sbjct: 2 tgagcaagatggagaagcagggcacgtgcattactagctcat 43
>48473_csi-miR164:pmrd
Length = 168
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 34 tggagaagcagggcacgtgtattactaactca 65
||||||||||||||||||| ||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
>48709_mtr-miR164b:pmrd
Length = 144
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 29 caaggtggagaagcagggcacgtgtattactaactcat 66
|||| ||||||||||||||||||| | |||||||||||
Sbjct: 1 caagatggagaagcagggcacgtgcaatactaactcat 38
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 198 tgagttagtgttccatgtgcccatcttccccatcatga 235
||||||||| | ||||||||| |||||||||||||||
Sbjct: 107 tgagttagttcttcatgtgcccctcttccccatcatga 144
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 29 caaggtggagaagcagggcacgtgtattactaactcat 66
|||| ||||||||||||||||||| ||||||| |||||
Sbjct: 1 caagatggagaagcagggcacgtgcattactagctcat 38
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 197 atgagttagtgttccatgtgcccatcttccccatcatg 234
|||||||||| | ||||||||||||||| ||||||||
Sbjct: 122 atgagttagttcttcatgtgcccatcttcaccatcatg 159
>46941_ath-miR164b:pmrd
Length = 153
Score = 50.1 bits (25), Expect = 9e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 34 tggagaagcagggcacgtgtattactaactcat 66
||||||||||||||||||| ||||||| |||||
Sbjct: 3 tggagaagcagggcacgtgcattactagctcat 35
>54956_zma-miR164h:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 32 ggtggagaagcagggcacgtgtattac 58
||||||||||||||||||||| |||||
Sbjct: 2 ggtggagaagcagggcacgtgcattac 28
>54950_zma-miR164b:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 32 ggtggagaagcagggcacgtgtattac 58
||||||||||||||||||||| |||||
Sbjct: 19 ggtggagaagcagggcacgtgcattac 45
>48839_osa-miR164b:pmrd
Length = 109
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 32 ggtggagaagcagggcacgtgtattac 58
||||||||||||||||||||| |||||
Sbjct: 7 ggtggagaagcagggcacgtgcattac 33
>48843_osa-miR164f:pmrd
Length = 210
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 aggtggagaagcagggcacgtg 52
||||||||||||||||||||||
Sbjct: 21 aggtggagaagcagggcacgtg 42
>54953_zma-miR164e:pmrd
Length = 242
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ggtggagaagcagggcacgtg 52
|||||||||||||||||||||
Sbjct: 2 ggtggagaagcagggcacgtg 22
>54951_zma-miR164c:pmrd
Length = 270
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ggtggagaagcagggcacgtg 52
|||||||||||||||||||||
Sbjct: 16 ggtggagaagcagggcacgtg 36
>54410_sbi-miR164:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 34 tggagaagcagggcacgtgtattac 58
||||||||||||||||||| |||||
Sbjct: 1 tggagaagcagggcacgtgcattac 25
>48842_osa-miR164e:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ggtggagaagcagggcacgtg 52
|||||||||||||||||||||
Sbjct: 9 ggtggagaagcagggcacgtg 29
