miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51918_ptc-miRf10096-akr:pmrd
          Length = 121

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                    
Query: 2  aaagggttgctaacagagtttattggcattctgtccacctcc 43
          |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 3  aaagggtttcttacagagtttattggcattctgtccacctcc 44



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 82  tggaggtgggcatactgtcaactgagttctgttg 115
           ||||||||||||||||| |||| ||| |||||||
Sbjct: 76  tggaggtgggcatactgccaaccgagctctgttg 109




>54852_vvi-miR394b:pmrd
          Length = 93

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 14 acagagtttattggcattctgtccacctcc 43
          ||||||||||||||||||||||||||||||
Sbjct: 1  acagagtttattggcattctgtccacctcc 30




>54853_vvi-miR394c:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 ttggcattctgtccacctcca 44
          |||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcca 31




>54851_vvi-miR394a:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 ttggcattctgtccacctcca 44
          |||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcca 31




>48502_ghr-miR394:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 ttggcattctgtccacctcca 44
          |||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcca 21




>55065_zma-miR394b:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>55064_zma-miR394a:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54472_sbi-miR394b:pmrd
          Length = 111

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54471_sbi-miR394a:pmrd
          Length = 110

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>48920_osa-miR394:pmrd
          Length = 110

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>47001_ath-miR394b:pmrd
          Length = 121

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>47000_ath-miR394a:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 ttggcattctgtccacctcc 43
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33