miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48625_gma-miR2108a:pmrd
          Length = 58

 Score =  115 bits (58), Expect = 4e-27
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                    
Query: 5  ctgtgttttaatgtgttgtgtttgtcggaacccctgattacatttttgttaagcgcag 62
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ctgtgttttaatgtgttgtgtttgtcggaacccctgattacatttttgttaagcgcag 58





>48626_gma-miR2108b:pmrd
          Length = 67

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                    
Query: 9  gttttaatgtgttgtgtttgtcggaacccctgattacatttttgttaagcgcagcgag 66
          |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 1  gttttaatgtgttgtgtttgtgagaacccctgattacatttttgttaagcgcagcgag 58





>48725_mtr-miR235a:pmrd
          Length = 163

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 8   tgttttaatgtgttgtgtttgt 29
           ||||||||||||||||||||||
Sbjct: 129 tgttttaatgtgttgtgtttgt 150