miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>50634_osa-miRf11419-akr:pmrd
          Length = 151

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 37 ggttaagcgtgcttggcttagagaaattttgggatgggtg 76
          ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 8  ggttaagcgtgcttggcctagagtaattttgggatgggtg 47




>49972_osa-miRf10757-akr:pmrd
          Length = 87

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                        
Query: 36 aggttaagcgtgcttggcttagagaaattttgggatgggtgaccga 81
          |||||||||||||||||| | |||  |||| |||||||||||||||
Sbjct: 35 aggttaagcgtgcttggcctggagcgatttcgggatgggtgaccga 80




>49495_osa-miRf10280-akr:pmrd
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                   
Query: 37 ggttaagcgtgcttggcttagagaaattttgggatgggtga 77
          ||||||||||||||||| | ||| || ||||||||||||||
Sbjct: 7  ggttaagcgtgcttggcctggagcaa-tttgggatgggtga 46