miRNEST 2.0, an integrative microRNA resource :: BLAST
>54445_sbi-miR169i:pmrd
Length = 169
Score = 125 bits (63), Expect = 2e-29
Identities = 151/176 (85%), Gaps = 12/176 (6%)
Strand = Plus / Plus
Query: 54 gatggagagcccc-ttttggtagccaagaatgacttgcctatgcacgccctctgttggta 112
||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1 gatggagagcccccttttgctagccaagaatgacttgcctatgcatgccctctgttggca 60
Query: 113 gttccgtccggcagccatggcgacggttgcacaaggtgagtttttgcggcgtgga----g 168
|||| || ||||||||| || ||||||||||||| |||||||||| | || |
Sbjct: 61 attcc-tc---cagccatggaga---ttgcacaaggtgaatttttgcggcatagatgatg 113
Query: 169 gatgcaatgcggctgcatcggcaggtcttcttggctagacagagggctctcgtcca 224
||||||||| |||||||| ||||||||||||||||||| ||||| |||||| ||||
Sbjct: 114 gatgcaatgtggctgcatgggcaggtcttcttggctagccagagtgctctcatcca 169
>48889_osa-miR169n:pmrd
Length = 177
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcctatg 95
||||||||||||||||||||||||||||
Sbjct: 6 tttggtagccaagaatgacttgcctatg 33
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 171 tgcaatgcggctgcatcggcaggtcttcttggctagacagag 212
||||||| |||||||| ||| ||||||||||||||| |||||
Sbjct: 132 tgcaatgtggctgcatgggccggtcttcttggctagccagag 173
>48890_osa-miR169o:pmrd
Length = 173
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgccta 93
||||||||||||||||||||||||||
Sbjct: 6 tttggtagccaagaatgacttgccta 31
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 171 tgcaatgcggctgcatcggcaggtcttcttggctagacagag 212
||||||| |||||||| ||| ||||||||||||||| |||||
Sbjct: 128 tgcaatgaggctgcatgggccggtcttcttggctagccagag 169
>51675_ptc-miR169r:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcctat 94
||||||||||||| |||||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcctat 32
>48354_bna-miR169e:pmrd
Length = 276
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcctat 94
||||||||||||| |||||||||||||
Sbjct: 246 tttggtagccaaggatgacttgcctat 272
>48352_bna-miR169c:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcctat 94
||||||||||||| |||||||||||||
Sbjct: 21 tttggtagccaaggatgacttgcctat 47
>54440_sbi-miR169d:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgccta 93
||||||||||||| ||||||||||||
Sbjct: 16 tttggtagccaaggatgacttgccta 41
>54439_sbi-miR169c:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgccta 93
||||||||||||| ||||||||||||
Sbjct: 16 tttggtagccaaggatgacttgccta 41
>48355_bna-miR169f:pmrd
Length = 201
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgccta 93
||||||||||||| ||||||||||||
Sbjct: 26 tttggtagccaaggatgacttgccta 51
>48353_bna-miR169d:pmrd
Length = 220
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgccta 93
||||||||||||| ||||||||||||
Sbjct: 35 tttggtagccaaggatgacttgccta 60
>54548_sly-miR169b:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 166 tttggtagccaaggatgacttgcct 190
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 10 tttggtagccaaggatgacttgcct 34
>51670_ptc-miR169m:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcct 30
>51668_ptc-miR169k:pmrd
Length = 203
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcct 30
>51666_ptc-miR169i:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcct 30
>48882_osa-miR169g:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 70 tggtagccaagaatgacttgcctat 94
||||||||||| |||||||||||||
Sbjct: 8 tggtagccaaggatgacttgcctat 32
>48487_ghb-miR169a:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 45 tttggtagccaaggatgacttgcct 69
>46973_ath-miR169m:pmrd
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 37 tttggtagccaaggatgacttgcct 61
>46971_ath-miR169k:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 38 tttggtagccaaggatgacttgcct 62
>46969_ath-miR169i:pmrd
Length = 206
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcct 92
||||||||||||| |||||||||||
Sbjct: 35 tttggtagccaaggatgacttgcct 59
>55009_zma-miR169g:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 tggtagccaagaatgacttgccta 93
||||||||||| ||||||||||||
Sbjct: 18 tggtagccaaggatgacttgccta 41
>54826_vvi-miR169x:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 tggtagccaagaatgacttgccta 93
||||||||||| ||||||||||||
Sbjct: 9 tggtagccaaggatgacttgccta 32
>54450_sbi-miR169n:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 ggtagccaagaatgacttgcctat 94
|||||||||| |||||||||||||
Sbjct: 1 ggtagccaaggatgacttgcctat 24
>51680_ptc-miR169w:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcc 91
||||||||||||| ||||||||||
Sbjct: 5 tttggtagccaaggatgacttgcc 28
>51679_ptc-miR169v:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 tttggtagccaagaatgacttgcc 91
||||||||||||| ||||||||||
Sbjct: 5 tttggtagccaaggatgacttgcc 28
