miRNEST 2.0, an integrative microRNA resource :: BLAST
>55089_zma-miR398b:pmrd
Length = 142
Score = 172 bits (87), Expect = 5e-44
Identities = 101/105 (96%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 48 gagattgctcgcctcgcggtacggttcgtgctggcctggaccaccgtcgtcgccgttcat 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gagattgctcgcctcgcggtacggttcgtgctggcctggaccaccgtcgtcgccgttcat 97
Query: 108 cttgtatgc---ataatgctgcatgtgttctcaggtcgcccccgc 149
|||||| || |||||||||||||||||||||||||||||||||
Sbjct: 98 cttgtacgcataataatgctgcatgtgttctcaggtcgcccccgc 142
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 126 catgtgttctcaggtcgcccccgc 149
||||||||||||| ||||||||||
Sbjct: 24 catgtgttctcagttcgcccccgc 1
>55088_zma-miR398a:pmrd
Length = 142
Score = 172 bits (87), Expect = 5e-44
Identities = 101/105 (96%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 48 gagattgctcgcctcgcggtacggttcgtgctggcctggaccaccgtcgtcgccgttcat 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gagattgctcgcctcgcggtacggttcgtgctggcctggaccaccgtcgtcgccgttcat 46
Query: 108 cttgtatgc---ataatgctgcatgtgttctcaggtcgcccccgc 149
|||||| || |||||||||||||||||||||||||||||||||
Sbjct: 45 cttgtacgcataataatgctgcatgtgttctcaggtcgcccccgc 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccccgc 149
||||||||||||| ||||||||||
Sbjct: 119 catgtgttctcagttcgcccccgc 142
>55090_zma-miR398c:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 124 tgcatgtgttctcaggtcgcccccg 148
|||||||||||||||||||||||||
Sbjct: 84 tgcatgtgttctcaggtcgcccccg 108
>54744_tae-miR2025:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccccgc 149
||||||||||||||||||||||||
Sbjct: 69 catgtgttctcaggtcgcccccgc 92
>54876_vvi-miR398c:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccc 146
|||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccc 76
>54875_vvi-miR398b:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccc 146
|||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccc 76
>51746_ptc-miR398c:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccc 146
|||||||||||||||||||||
Sbjct: 66 catgtgttctcaggtcgcccc 86
>51745_ptc-miR398b:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccc 146
|||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccc 74
>48749_mtr-miR398a:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccc 146
|||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccc 75
>46890_aqc-miR398b:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 catgtgttctcaggtcgcccc 146
|||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccc 90
