miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54641_sof-miR172a:pmrd
Length = 300
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 68 ccggcggcggtagagaatcctgatgatgctgcag 101
|||| |||||||||||||||||||||||||||||
Sbjct: 267 ccggtggcggtagagaatcctgatgatgctgcag 300
>48913_osa-miR172p:pmrd
Length = 318
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 gtagagaatcctgatgatgctgcag 101
|||||||||||||||||||||||||
Sbjct: 294 gtagagaatcctgatgatgctgcag 318
>51706_ptc-miR172i:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 agagaatcctgatgatgctgca 100
||||||||||||||||||||||
Sbjct: 95 agagaatcctgatgatgctgca 116
>48911_osa-miR172n:pmrd
Length = 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 41 gagaatcctgatgatgctgcag 62
>48910_osa-miR172m:pmrd
Length = 297
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 276 gagaatcctgatgatgctgcag 297
>48667_hvv-miR172d:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 251 gagaatcctgatgatgctgcag 272
>48666_hvv-miR172c:pmrd
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 100 gagaatcctgatgatgctgcag 121
>48665_hvv-miR172b:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 69 gagaatcctgatgatgctgcag 90
>48664_hvv-miR172a:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 234 gagaatcctgatgatgctgcag 255
>48314_bdi-miR172d:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgcag 101
||||||||||||||||||||||
Sbjct: 71 gagaatcctgatgatgctgcag 92
>55047_zma-miR172n:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgca 100
|||||||||||||||||||||
Sbjct: 60 gagaatcctgatgatgctgca 80
>55046_zma-miR172m:pmrd
Length = 455
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 agaatcctgatgatgctgcag 101
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>54755_tca-miR172:pmrd
Length = 240
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 agaatcctgatgatgctgcag 101
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>54684_tae-miR172b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 agaatcctgatgatgctgcag 101
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>54683_tae-miR172a:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 agaatcctgatgatgctgcag 101
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>51549_psi-miR172:pmrd
Length = 68
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgca 100
|||||||||||||||||||||
Sbjct: 47 gagaatcctgatgatgctgca 67
>51337_pga-miR172:pmrd
Length = 248
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 gagaatcctgatgatgctgca 100
|||||||||||||||||||||
Sbjct: 227 gagaatcctgatgatgctgca 247
>48912_osa-miR172o:pmrd
Length = 53
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 agaatcctgatgatgctgcag 101
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
>46989_ath-miR172m:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 agaatcctgatgatgctgcag 101
|||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgcag 21
