miRNEST 2.0, an integrative microRNA resource :: BLAST
>49006_osa-miR444e:pmrd
Length = 140
Score = 95.6 bits (48), Expect = 8e-21
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 34 caactgcataacttgcgataaacttgttggaccatggtgt-gctgatgattttaccgcaa 92
|||||||||||||||||| |||||||||||| ||| | | || |||||||| ||||||
Sbjct: 35 caactgcataacttgcgagaaacttgttggatgatgatcttgccaatgattttgccgcaa 94
Query: 93 gttatgcagttgctgcctcaagcttgctgcct 124
||||||||||||||||||||||||| ||||||
Sbjct: 95 gttatgcagttgctgcctcaagcttactgcct 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 88 cgcaagttatgcagttgctgcctcaagctt 117
||||||||||||||||| |||||| |||||
Sbjct: 51 cgcaagttatgcagttggtgcctctagctt 22
>54691_tae-miR444:pmrd
Length = 426
Score = 85.7 bits (43), Expect = 8e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 89 gcaagttatgcagttgctgcctcaagcttgctgcctccctttgccaa 135
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaa 186
>48319_bdi-miR444:pmrd
Length = 110
Score = 73.8 bits (37), Expect = 3e-14
Identities = 44/45 (97%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 78 atgattttaccgcaagttatgcagttgctgcctcaagcttgctgc 122
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 67 atgattttaccg-aagttatgcagttgctgcctcaagcttgctgc 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 87 ccgcaagttatgcagttgctgcctc 111
|||||||||||| ||||||||||||
Sbjct: 39 ccgcaagttatggagttgctgcctc 15
>55114_zma-miR444a:pmrd
Length = 138
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 102 ttgctgcctcaagcttgctgcctccctttgccaa 135
||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctgcctcaagcttgctgcctccctttgccaa 34
>54743_tae-miR2024b:pmrd
Length = 142
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 89 gcaagttatgcagttgctgcctcaagcttgctgcctcc 126
|||||| |||||||||||||||||||||||||||||||
Sbjct: 105 gcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
>54376_pvi-miR444:pmrd
Length = 127
Score = 65.9 bits (33), Expect = 7e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 89 gcaagttatgcagttgctgcctcaagcttgctgcctccctttgcc 133
||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 83 gcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcc 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 89 gcaagttatgcagttgctgcctcaagcttg 118
||||| ||||||||||||||||| ||||||
Sbjct: 44 gcaagatatgcagttgctgcctctagcttg 15
>55115_zma-miR444b:pmrd
Length = 174
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 102 ttgctgcctcaagcttgctgcctccctttgccaa 135
|||||||||||||||| |||||||||||||||||
Sbjct: 1 ttgctgcctcaagcttcctgcctccctttgccaa 34
>49007_osa-miR444f:pmrd
Length = 154
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 89 gcaagttatgcagttgctgcctcaagcttgctgcctcc 126
||||||| |||||||| |||||||||||||||||||||
Sbjct: 116 gcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
>48798_oru-miR444:pmrd
Length = 165
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 89 gcaagttatgcagttgctgcctcaagcttgctgcctcc 126
||||||| |||||||| |||||||||||||||||||||
Sbjct: 121 gcaagttgtgcagttgttgcctcaagcttgctgcctcc 158
>54742_tae-miR2024a:pmrd
Length = 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 88 cgcaagttatgcagttgctgcctcaagcttgctgcctcc 126
|||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 80 cgcaagttgtgcagttgctgtctcaagcttgctgactcc 118
