miRNEST 2.0, an integrative microRNA resource :: BLAST
>54930_zma-miR159a:pmrd
Length = 246
Score = 422 bits (213), Expect = e-119
Identities = 240/246 (97%), Gaps = 4/246 (1%)
Strand = Plus / Plus
Query: 1 gatgctttgggtttgaagcggagctcctatcattccaatgaagggnncgttccgaagggc 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3 gatgctttgggtttgaagcggagctcctatcattccaatgaagggt-cgttccgaagggc 61
Query: 61 tggttccgctgctcgttcatggttcccactatcctatctcatcatgtgtatatatgtaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tggttccgctgctcgttcatggttcccactatcctatctcatcatgtgtatatatgtaat 121
Query: 121 ccattggggggagggtttctctcgtctttgagatnaggnttgtggtttgcatgaccgagg 180
|||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 122 ccat--gggggagggtttctctcgtctttgagat-aggcttgtggtttgcatgaccgagg 178
Query: 181 agctgcaccgcccccttgctggccgctctttggattgaagggagctctgcatcctgatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agctgcaccgcccccttgctggccgctctttggattgaagggagctctgcatcctgatcc 238
Query: 241 acccct 246
||||||
Sbjct: 239 acccct 244
>54628_sof-miR159a:pmrd
Length = 265
Score = 168 bits (85), Expect = 1e-42
Identities = 97/100 (97%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 142 tcgtctttgagatnaggnttgtggtttgcatgaccgaggagctgcaccgcccccttgctg 201
||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 160 tcgtctttgagat-aggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctg 218
Query: 202 gccgctctttggattgaagggagctctgcatcctgatcca 241
||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gccgctctttggattgaagggagctctgcatcctgatcca 258
Score = 139 bits (70), Expect = 1e-33
Identities = 95/101 (94%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 7 ttgggtttgaagcggagctcctatcattccaatgaagggnncgttccgaagggctggttc 66
|||| |||||||||||||||||||||||||||||||||| ||||| |||||| || |||
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggc-cgttctgaagggttg-ttc 66
Query: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
>54629_sof-miR159b:pmrd
Length = 266
Score = 161 bits (81), Expect = 3e-40
Identities = 93/96 (96%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 142 tcgtctttgagatnaggnttgtggtttgcatgaccgaggagctgcaccgcccccttgctg 201
||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 161 tcgtctttgagat-aggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctg 219
Query: 202 gccgctctttggattgaagggagctctgcatcctga 237
||||||||||||||||||||||||||||||||||||
Sbjct: 220 gccgctctttggattgaagggagctctgcatcctga 255
Score = 147 bits (74), Expect = 5e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 7 ttgggtttgaagcggagctcctatcattccaatgaagggnncgttccgaagggctggttc 66
|||| |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggc-cgttctgaaggg-tggttc 66
Query: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
>54632_sof-miR159e:pmrd
Length = 264
Score = 147 bits (74), Expect = 5e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 7 ttgggtttgaagcggagctcctatcattccaatgaagggnncgttccgaagggctggttc 66
|||| |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 8 ttggatttgaagcggagctcctatcattccaatgaagggc-cgttctgaaggg-tggttc 65
Query: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cgctgctcgttcatggttcccactatcctatctcatcatgt 106
Score = 127 bits (64), Expect = 4e-30
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 142 tcgtctttgagatnaggnttgtggtttgcatgaccgaggagctgcaccgcccccttgctg 201
||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 159 tcgtctttgagat-aggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctg 217
Query: 202 gccgctctttggattgaagggagctct 228
|||||||||||||||||| ||||||||
Sbjct: 218 gccgctctttggattgaaaggagctct 244
>54631_sof-miR159d:pmrd
Length = 265
Score = 147 bits (74), Expect = 5e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 160 ttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggattgaa 219
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 177 ttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaa 236
Query: 220 gggagctctgcatcctgatcca 241
||||||||||||||||||||||
Sbjct: 237 gggagctctgcatcctgatcca 258
Score = 139 bits (70), Expect = 1e-33
Identities = 95/101 (94%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 7 ttgggtttgaagcggagctcctatcattccaatgaagggnncgttccgaagggctggttc 66
|||| |||||||||||||||||||||||||||||||||| ||||| |||||| || |||
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggc-cgttctgaagggttg-ttc 66
Query: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatcctatctcatcatgt 107
>51338_pgl-miR159:pmrd
Length = 226
Score = 125 bits (63), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 156 aggnttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggat 215
||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 153 aggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggat 212
Query: 216 tgaagggagctctg 229
||||||||||||||
Sbjct: 213 tgaagggagctctg 226
Score = 69.9 bits (35), Expect = 9e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 68 gctgctcgttcatggttcccactatcctatctcat 102
|||||||||||||||||||||||||||||||||||
Sbjct: 49 gctgctcgttcatggttcccactatcctatctcat 83
>54392_sar-miR159:pmrd
Length = 175
Score = 97.6 bits (49), Expect = 4e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 161 tgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggattgaag 220
||||| ||||||||||||||||| ||| || ||||| |||||||||||||||||||||||
Sbjct: 107 tgtggcttgcatgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaag 166
Query: 221 ggagctctg 229
|||||||||
Sbjct: 167 ggagctctg 175
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 54 gaagggctggttccgctgctcgttcatggttcccactatccta 96
|||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 36 gaaggggtggtacagctgctcgttcatggttcccactatccta 78
>54931_zma-miR159b:pmrd
Length = 221
Score = 91.7 bits (46), Expect = 2e-19
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 160 ttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggattgaa 219
||||||||||||||||||||||||||||| |||| | | || ||||| |||||||||||
Sbjct: 133 ttgtggtttgcatgaccgaggagctgcacgtccccttcgttgaccgctgtttggattgaa 192
Query: 220 gggagctctgcatc 233
||||||||||||||
Sbjct: 193 gggagctctgcatc 206
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 68 gctgctcgttcatggttcccactatcctatctcatca 104
||||||||||||||||||||||| ||| |||||||||
Sbjct: 68 gctgctcgttcatggttcccactgtcccatctcatca 104
>48820_osa-miR159b:pmrd
Length = 188
Score = 81.8 bits (41), Expect = 2e-16
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 156 aggnttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggat 215
||| ||||||||||||||||| |||||| | | | | |||||||| || ||||||||||
Sbjct: 105 aggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctttggat 164
Query: 216 tgaagggagctctgcatcctgatc 239
|||||||||||||||||| |||||
Sbjct: 165 tgaagggagctctgcatcttgatc 188
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 68 gctgctcgttcatggttcccactatcctatctcat 102
|||||| |||||||||||||||||| |||||||||
Sbjct: 58 gctgcttgttcatggttcccactattctatctcat 92
>54673_tae-miR159a:pmrd
Length = 177
Score = 79.8 bits (40), Expect = 9e-16
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 161 tgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggattgaag 220
||||||||||||||||||||||| || || |||| |||| ||||| ||||||||||||
Sbjct: 106 tgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaag 165
Query: 221 ggagctctgcat 232
||||||||||||
Sbjct: 166 ggagctctgcat 177
Score = 75.8 bits (38), Expect = 1e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 20 ggagctcctatcattccaatgaagggnncgttccgaagggctggttccgctgctcgttca 79
|||||||||||||||||||||||||| | | |||||| | || | ||||||||||||
Sbjct: 3 ggagctcctatcattccaatgaagggt-ctaccggaagggtttgtgcagctgctcgttca 61
Query: 80 tggttcccactatcctatctc 100
|||||||||||||||||||||
Sbjct: 62 tggttcccactatcctatctc 82
>54937_zma-miR159m:pmrd
Length = 457
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctctgcatcctgatccacccct 246
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatcctgatccacccct 38
>54934_zma-miR159e:pmrd
Length = 203
Score = 71.9 bits (36), Expect = 2e-13
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 160 ttgtggtttgcatgaccgaggagctgcaccgccccctt-gctggccgctctttggattga 218
||||||||||||||||||||||||||| || |||||| | || ||||| |||||| |||
Sbjct: 132 ttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtga 191
Query: 219 agggagctctgc 230
||||||||||||
Sbjct: 192 agggagctctgc 203
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 68 gctgctcgttcatggttcccactatcctatctcatca 104
||||||||||||||||||||||| ||| |||||||||
Sbjct: 50 gctgctcgttcatggttcccactgtcccatctcatca 86
>48657_hvv-miR159b:pmrd
Length = 174
Score = 69.9 bits (35), Expect = 9e-13
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 156 aggnttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctttggat 215
||| ||||||||||||||| |||||||| || || |||| |||| ||||| |||||||
Sbjct: 101 aggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtttggat 160
Query: 216 tgaagggagctctg 229
||||||||||||||
Sbjct: 161 tgaagggagctctg 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 20 ggagctcctatcattccaatgaagggnncgttccgaagggctggttccgctgctcgttca 79
|||||||||||||||||||||||||| | | |||||| | || | |||||| |||||
Sbjct: 2 ggagctcctatcattccaatgaagggt-ctaccggaagggtttgtgcagctgcttgttca 60
Query: 80 tggttcccactatcctatctc 100
|||||||||||||||||||||
Sbjct: 61 tggttcccactatcctatctc 81
>54653_spr-miR159:pmrd
Length = 392
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctctgcatcctgatcca 241
|||||||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatcctgatcca 33
>54674_tae-miR159b:pmrd
Length = 255
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 206 ctctttggattgaagggagctctgcatc 233
||||||||||||||||||||||||||||
Sbjct: 227 ctctttggattgaagggagctctgcatc 254
>48819_osa-miR159a:pmrd
Length = 272
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 206 ctctttggattgaagggagctctgcatc 233
||||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgcatc 266
>48796_oru-miR159:pmrd
Length = 274
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 206 ctctttggattgaagggagctctgcatc 233
||||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgcatc 266
>48656_hvv-miR159a:pmrd
Length = 303
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctctgcatcctgatc 239
||||||||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctgcatcttgatc 31
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 206 ctctttggattgaagggagctctg 229
||||||||||||||||||||||||
Sbjct: 226 ctctttggattgaagggagctctg 249
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctctgcatc 233
|||||||||||||||||||||| ||||
Sbjct: 166 tctttggattgaagggagctcttcatc 192
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 207 tctttggattgaagggagctct 228
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctctgcatc 233
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctacatc 25
>54777_vvi-miR159c:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48728_mtr-miR319b:pmrd
Length = 42
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 210 ttggattgaagggagctctgcatc 233
||||||||||||||||||| ||||
Sbjct: 1 ttggattgaagggagctctacatc 24
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 209 tttggattgaagggagctct 228
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
