miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49043_osa-miR809h:pmrd
Length = 134
Score = 73.8 bits (37), Expect = 1e-14
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 63 tgtctagattcattaacatcaatatgaatgtgggaaatgttagaa 19
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 30 tagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||| ||||| |||||| || ||||||||||||
Sbjct: 76 tagattcattaaaatcaatatgaatgtgagaaatgttagaa 116
>49039_osa-miR809d:pmrd
Length = 167
Score = 65.9 bits (33), Expect = 3e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 37
Score = 61.9 bits (31), Expect = 5e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 92 tctagattcattaacatcaatatgaatgtgagaaatgttagaa 134
>49036_osa-miR809a:pmrd
Length = 161
Score = 65.9 bits (33), Expect = 3e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 86 tgtctagattcattaacatcaatatgaatgtgagaaatgttagaa 130
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 tagcatttttcacattcatattg 27
|||||||||||| ||||||||||
Sbjct: 34 tagcatttttcaaattcatattg 56
>49035_osa-miR808:pmrd
Length = 152
Score = 65.9 bits (33), Expect = 3e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 81 tgtctagattcattaacatcaatatgaatgtgggaaatgtaagaa 125
Score = 54.0 bits (27), Expect = 1e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||| |||||| ||| ||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatgtggaaaatgctagaa 28
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 tagcatttttcacattcatattg 27
||||||||| |||||||||||||
Sbjct: 31 tagcattttccacattcatattg 53
>49017_osa-miR446:pmrd
Length = 175
Score = 65.9 bits (33), Expect = 3e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||| ||||||||||| |||||||||||||||| |||||
Sbjct: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaa 133
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 30 tagattcattaacatcaacatgaatatgggaaat 63
|||||||||||||||||| || ||| ||||||||
Sbjct: 76 tagattcattaacatcaatataaatgtgggaaat 43
>49001_osa-miR441a:pmrd
Length = 153
Score = 65.9 bits (33), Expect = 3e-12
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 attttagcatttttcacattcatattg-tctagattcattaacatcaacatgaatatggg 59
|||||||||||| ||||||||||||| ||||||||||||| |||||| || ||| ||||
Sbjct: 44 attttagcatttcacacattcatattgatctagattcattaccatcaatataaatgtggg 103
Query: 60 aaatg 64
|||||
Sbjct: 104 aaatg 108
>49037_osa-miR809b:pmrd
Length = 152
Score = 61.9 bits (31), Expect = 5e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 37
>50020_osa-miRf10805-akr:pmrd
Length = 111
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatg 64
|||||||||||||||||||| |||||| |||||||||
Sbjct: 74 tctagattcattaacatcaatatgaatgtgggaaatg 38
>49551_osa-miRf10336-akr:pmrd
Length = 108
Score = 58.0 bits (29), Expect = 8e-10
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||| || |||||| ||||||||| |||||
Sbjct: 57 tgtctagattcattaacattaatatgaatgtgggaaatgctagaa 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||| ||||||||||||||| | |||| ||||||||| |||||
Sbjct: 50 tctatattcattaacatcaatacgaatgtgggaaatgctagaa 8
>49042_osa-miR809g:pmrd
Length = 152
Score = 58.0 bits (29), Expect = 8e-10
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||| |||||| |||||| || ||||||||||||
Sbjct: 81 tgtctagattcattagcatcaatatgaatgtgagaaatgttagaa 125
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 33 attcattaacatcaacatgaatatgggaaatg 64
|||||||| |||||| ||||||||||||||||
Sbjct: 65 attcattagcatcaatatgaatatgggaaatg 34
>49040_osa-miR809e:pmrd
Length = 161
Score = 58.0 bits (29), Expect = 8e-10
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||| ||||||||||| |||||| || ||||||||||||
Sbjct: 89 tgtctagatttattaacatcaatatgaatgtgagaaatgttagaa 133
Score = 50.1 bits (25), Expect = 2e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||| || || ||| | |||||||||||||
Sbjct: 73 tgtctagattcattaacattaatataaatgtaggaaatgttagaa 29
>54707_tae-miR1132:pmrd
Length = 154
Score = 54.0 bits (27), Expect = 1e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||| | | |||||| |||||||||||||||
Sbjct: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaa 126
Score = 42.1 bits (21), Expect = 5e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||| | | |||||| ||| ||||| |||||
Sbjct: 73 tgtctagattcattaacacctatatgaatgtggaaaatgctagaa 29
>49002_osa-miR441b:pmrd
Length = 152
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 27 gtctagattcattaacatcaacatgaatatg 57
||||||||||||||||||||| |||||||||
Sbjct: 87 gtctagattcattaacatcaatatgaatatg 57
>49075_osa-miR819d:pmrd
Length = 152
Score = 52.0 bits (26), Expect = 5e-08
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 25 ttgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 75 ttgtctagattcattaacatctatatgaatgtgggcaatgctagaa 30
Score = 50.1 bits (25), Expect = 2e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
>49369_osa-miRf10154-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 30 tagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||| |||||| ||| ||||| |||||
Sbjct: 36 tagattcattaacatcaatatgaatgtggaaaatgctagaa 76
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 tagcatttttcacattcatattg 27
||||||||| |||||||||||||
Sbjct: 73 tagcattttccacattcatattg 51
>49082_osa-miR819k:pmrd
Length = 156
Score = 50.1 bits (25), Expect = 2e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||| ||||||||||||||| | ||||||||||| |||| |||||
Sbjct: 74 tgtcaagattcattaacatctatatgaatatgggcaatgctagaa 30
>49078_osa-miR819g:pmrd
Length = 147
Score = 50.1 bits (25), Expect = 2e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||| | |||||| |||| ||||||||||
Sbjct: 79 tgtctagattcattaacatatatatgaatgtgggtaatgttagaa 123
>49041_osa-miR809f:pmrd
Length = 154
Score = 50.1 bits (25), Expect = 2e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||| || |||||| || |||||| |||||
Sbjct: 73 tgtctagattcattaacattaatatgaatgtgagaaatgatagaa 29
Score = 46.1 bits (23), Expect = 3e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||| |||||||| |||||| |||||| || ||||||||||||
Sbjct: 84 tctaaattcattaccatcaatatgaatgtgagaaatgttagaa 126
>49003_osa-miR441c:pmrd
Length = 154
Score = 50.1 bits (25), Expect = 2e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||| |||||| || ||| ||||||||| |||||
Sbjct: 82 tgtctagattcattaccatcaatataaatgtgggaaatgctagaa 126
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 attttagcatttttcacattcatattg 27
|||||||||||||||| ||| ||||||
Sbjct: 28 attttagcatttttcatatttatattg 54
>49388_osa-miRf10173-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 8e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 35 tcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||| |||||| ||||||||| |||||
Sbjct: 71 tcattaacatcaatatgaatgtgggaaatgctagaa 36
>49076_osa-miR819e:pmrd
Length = 154
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 29 ctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 70 ctagattcattaacatctatatgaatgtgggcaatgctagaa 29
>49074_osa-miR819c:pmrd
Length = 154
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 29 ctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 70 ctagattcattaacatctatatgaatgtgggcaatgctagaa 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 82 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 126
>49072_osa-miR819a:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 29 ctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 24
>49038_osa-miR809c:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 1e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 33 attcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||| |||||| || ||||||||||||
Sbjct: 90 attcattaacatcaa-atgaatgtgagaaatgttagaa 126
Score = 38.2 bits (19), Expect = 8e-04
Identities = 37/43 (86%)
Strand = Plus / Minus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||| || || |||||||| ||| ||| |||||
Sbjct: 72 tctagattcattaatattaatatgaatataggatatgctagaa 30
>51231_osa-miRf12016-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 30 tagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||| ||| |||||| |||| |||| |||||
Sbjct: 47 tagattcattaacaccaatatgaatgtggggaatgctagaa 87
>51230_osa-miRf12015-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 30 tagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||| ||| |||||| |||| |||| |||||
Sbjct: 57 tagattcattaacaccaatatgaatgtggggaatgctagaa 17
>51229_osa-miRf12014-akr:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 30 tagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||| ||| |||||| |||| |||| |||||
Sbjct: 60 tagattcattaacaccaatatgaatgtggggaatgctagaa 20
>49416_osa-miRf10201-akr:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 5e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||||||| | ||| || |||| |||| |||||
Sbjct: 53 tgtctagattcattaacatctatatgtatgtgggcaatgctagaa 9
>49081_osa-miR819j:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 5e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 94 tgtctagattcattaacatatatatgaatgtgggcaatgctagaa 138
>49080_osa-miR819i:pmrd
Length = 198
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 30 tagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||| | ||||||| ||| |||| |||||
Sbjct: 112 tagattcattaacatctatatgaatacgggcaatgctagaa 152
>49073_osa-miR819b:pmrd
Length = 166
Score = 42.1 bits (21), Expect = 5e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 26 tgtctagattcattaacatcaacatgaatatgggaaatgttagaa 70
|||||||||||||||| ||| | |||||| |||| |||| |||||
Sbjct: 79 tgtctagattcattaatatctatatgaatgtgggtaatgctagaa 35
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacat 44
|||||||||||||||||||
Sbjct: 88 tgtctagattcattaacat 106
>50672_osa-miRf11457-akr:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 31 agattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||| ||| |||| | |||| ||||||
Sbjct: 60 agattcattaacatcaatatggatatagaaaatattagaa 99
>49907_osa-miRf10692-akr:pmrd
Length = 103
Score = 38.2 bits (19), Expect = 8e-04
Identities = 37/43 (86%)
Strand = Plus / Plus
Query: 28 tctagattcattaacatcaacatgaatatgggaaatgttagaa 70
||||||||||||||||| | |||||| |||| |||| |||||
Sbjct: 54 tctagattcattaacatttatatgaatgtgggcaatgctagaa 96
>49079_osa-miR819h:pmrd
Length = 155
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 26 tgtctagattcattaacat 44
|||||||||||||||||||
Sbjct: 83 tgtctagattcattaacat 101
