miRNEST 2.0, an integrative microRNA resource :: BLAST
>49011_osa-miR445d:pmrd
Length = 312
Score = 135 bits (68), Expect = 2e-32
Identities = 191/229 (83%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 66 tattaaacgtagactattaataaaacccat-ccataatcttggactaatttgcgagacga 124
|||||||| ||||||| | | ||| ||||| |||||| | |||| ||||| |||||| ||
Sbjct: 52 tattaaacatagactaatgacaaaccccattccataaccctggattaattcgcgagatga 111
Query: 125 atctaatgagcctaattaatccataattaacctatgtgatgttacagtaaacattctcta 184
||||| |||| |||||||||| || |||| ||||||||||| |||| ||||||| ||
Sbjct: 112 atctattgagtctaattaatcaatgattagcctatgtgatgctacactaaacatgtgtta 171
Query: 185 attatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaatt 244
||||| ||||||||||||||||||| ||| |||| ||||||||| | ||||||| ||||
Sbjct: 172 attatggattaattaggcttaaaaattttgtctcacgaattagctctcatttatgcaatt 231
Query: 245 ----gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
|||||||||||||| ||| ||||||| ||||||||||||| ||||
Sbjct: 232 attagttttgtaagtagtttatgtttaata-tctaaattagtgtataaa 279
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 133 agcctaattaatccataattaac 155
|||||||||||||||||||||||
Sbjct: 190 agcctaattaatccataattaac 168
>49008_osa-miR445a:pmrd
Length = 268
Score = 123 bits (62), Expect = 9e-29
Identities = 184/222 (82%), Gaps = 2/222 (0%)
Strand = Plus / Minus
Query: 66 tattaaacgtagactattaataaaacccatcc-ataatcttggactaatttgcgagacga 124
|||||||| || |||| | |||||||| || | |||| |||||||||||| |||||||||
Sbjct: 237 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 178
Query: 125 atctaatgagcctaattaatccataattaacctatgtgatgttacagtaaacattctcta 184
|||| |||| ||||||| |||| ||| | |||||||| |||||||||| || ||
Sbjct: 177 atcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaacttttcata 118
Query: 185 attatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaatt 244
||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||||
Sbjct: 117 attatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaatt 58
Query: 245 -gttttgtaagtagtctatatttaatactctaaattagtgtc 285
||||| | | |||||||| |||||||||| |||||||||||
Sbjct: 57 agtttttttattagtctatgtttaatactccaaattagtgtc 16
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 109 ctaatttgcgagacgaatctaatgagcctaattaatccataatta 153
||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 75 ctaatctgcgagacgaattttttaagcctaattaatccataatta 119
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 245 gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
||||| ||| |||| ||| ||||||||||||||||||||| ||||
Sbjct: 212 gttttataattagtgtatgtttaatactctaaattagtgtataaa 256
>49015_osa-miR445h:pmrd
Length = 277
Score = 87.7 bits (44), Expect = 5e-18
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||
Sbjct: 132 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 73
Query: 243 tt-gttttgtaagtagtctatatttaatactctaaattagtgtc 285
|| ||||| | | |||||||| |||||||||| |||||||||||
Sbjct: 72 ttagtttttttattagtctatgtttaatactccaaattagtgtc 29
Score = 52.0 bits (26), Expect = 3e-07
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 66 tattaaacgtagactattaataaaacccatcc-ataatcttggactaatttgcgagacga 124
|||||||| || |||| | |||||||| || | |||| |||||||||||| |||||||||
Sbjct: 233 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 174
Query: 125 atctaatgagcctaatta 142
|||| |||| |||||||
Sbjct: 173 atcttttgagtctaatta 156
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 109 ctaatttgcgagacgaatctaatgagcctaattaatccataatta 153
||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 88 ctaatctgcgagacgaattttttaagcctaattaatccataatta 132
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 245 gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
||||| ||| |||| ||| ||||||||||||||||||||| ||||
Sbjct: 208 gttttataattagtgtatgtttaatactctaaattagtgtataaa 252
>51109_osa-miRf11894-akr:pmrd
Length = 96
Score = 83.8 bits (42), Expect = 8e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 7 ttagatgggactaaaacttttaagtccctatcacatcggatg 48
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ttagatgggactaaaacttttaagtccctatcacatcggatg 80
>51108_osa-miRf11893-akr:pmrd
Length = 98
Score = 83.8 bits (42), Expect = 8e-17
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 7 ttagatgggactaaaacttttaagtccctatcacatcggatg 48
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 ttagatgggactaaaacttttaagtccctatcacatcggatg 18
>49016_osa-miR445i:pmrd
Length = 244
Score = 79.8 bits (40), Expect = 1e-15
Identities = 87/100 (87%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| ||||||||||||||||||| || ||||| ||||||||| ||||||| ||
Sbjct: 133 taattatggattaattaggcttaaaaa-ttcatctcacagattagctttcatttatgaaa 75
Query: 243 tt-gttttgtaagtagtctatatttaatactctaaattag 281
|| ||||| | | |||||||||||||||||||||||||||
Sbjct: 74 ttagtttttttattagtctatatttaatactctaaattag 35
Score = 48.1 bits (24), Expect = 4e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 66 tattaaacgtagactattaataaaacccatcc-ataatcttggactaatttgcgagacga 124
|||||||| || |||| | |||||||| || | |||| |||||||||||| |||||||||
Sbjct: 199 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 140
Query: 125 atct 128
||||
Sbjct: 139 atct 136
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 133 agcctaattaatccataattaa 154
||||||||||||||||||||||
Sbjct: 113 agcctaattaatccataattaa 134
Score = 42.1 bits (21), Expect = 3e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 245 gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
||||| ||| |||| ||| ||||||||| ||||||||||| ||||
Sbjct: 174 gttttataattagtgtatgtttaatactttaaattagtgtataaa 218
>49014_osa-miR445g:pmrd
Length = 275
Score = 79.8 bits (40), Expect = 1e-15
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||
Sbjct: 131 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 72
Query: 243 tt-gttttgtaagtagtctatatttaatactctaaattag 281
|| ||||| | | |||||||| |||||||||| |||||||
Sbjct: 71 ttagtttttttattagtctatgtttaatactccaaattag 32
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 109 ctaatttgcgagacgaatctaatgagcctaattaatccataatta 153
||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 87 ctaatctgcgagacgaattttttaagcctaattaatccataatta 131
Score = 44.1 bits (22), Expect = 7e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 244 tgttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
|||||| ||| |||| ||| ||||||| ||||||||||||| ||||
Sbjct: 206 tgttttataattagtgtatgtttaatattctaaattagtgtataaa 251
>49012_osa-miR445e:pmrd
Length = 265
Score = 79.8 bits (40), Expect = 1e-15
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||
Sbjct: 126 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 67
Query: 243 tt-gttttgtaagtagtctatatttaatactctaaattag 281
|| ||||| | | |||||||| |||||||||| |||||||
Sbjct: 66 ttagtttttttattagtctatgtttaatactccaaattag 27
Score = 52.0 bits (26), Expect = 3e-07
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 66 tattaaacgtagactattaataaaacccatcc-ataatcttggactaatttgcgagacga 124
|||||||| || |||| | |||||||| || | |||| |||||||||||| |||||||||
Sbjct: 227 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 168
Query: 125 atctaatgagcctaatta 142
|||| |||| |||||||
Sbjct: 167 atcttttgagtctaatta 150
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 109 ctaatttgcgagacgaatctaatgagcctaattaatccataatta 153
||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 82 ctaatctgcgagacgaattttttaagcctaattaatccataatta 126
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 245 gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
||||| ||| |||| ||| ||||||||||||||||||||| ||||
Sbjct: 202 gttttataattagtgtatgtttaatactctaaattagtgtataaa 246
>49010_osa-miR445c:pmrd
Length = 260
Score = 79.8 bits (40), Expect = 1e-15
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||
Sbjct: 124 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 65
Query: 243 tt-gttttgtaagtagtctatatttaatactctaaattag 281
|| ||||| | | |||||||| |||||||||| |||||||
Sbjct: 64 ttagtttttttattagtctatgtttaatactccaaattag 25
Score = 58.0 bits (29), Expect = 4e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 245 gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
||||| ||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 200 gttttataattagtgtatatttaatactctaaattagtgtataaa 244
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 109 ctaatttgcgagacgaatctaatgagcctaattaatccataatta 153
||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 80 ctaatctgcgagacgaattttttaagcctaattaatccataatta 124
Score = 44.1 bits (22), Expect = 7e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 194 taattaggcttaaaaaatttatctcgtgaattag 227
||||||||||||||| ||| |||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcgtgaattag 181
Score = 42.1 bits (21), Expect = 3e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 98 ataatcttggactaatttgcgagacgaatctaatgagcctaatta 142
|||| |||||||||||| |||||||||||| | ||||||||||
Sbjct: 192 ataaccttggactaattcacgagacgaatcttttaagcctaatta 148
>49009_osa-miR445b:pmrd
Length = 264
Score = 77.8 bits (39), Expect = 5e-15
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| ||||||||||||||||||| || ||||| ||||||||| ||||||| ||
Sbjct: 125 taattatggattaattaggcttaaaaagttcgtctcgcagattagctttcatttatgaaa 66
Query: 243 ttgttttgtaagtagtctatatttaatactctaaattag 281
|| ||| | | |||||||| ||||||||||||||||||
Sbjct: 65 ttagttttttattagtctatgtttaatactctaaattag 27
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 98 ataatcttggactaatttgcgagacgaatctaatgagcctaatta 142
|||| |||||||||||| ||||||||||||| |||| |||||||
Sbjct: 193 ataaccttggactaattcgcgagacgaatcttttgagtctaatta 149
Score = 44.1 bits (22), Expect = 7e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 264 tttaatactctaaattagtgtctaaa 289
||||||||||||||||||||| ||||
Sbjct: 220 tttaatactctaaattagtgtataaa 245
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 133 agcctaattaatccataatta 153
|||||||||||||||||||||
Sbjct: 105 agcctaattaatccataatta 125
>49497_osa-miRf10282-akr:pmrd
Length = 127
Score = 75.8 bits (38), Expect = 2e-14
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 7 ttagatgggactaaaacttttaagtccctatcacatcggatg 48
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 54 ttagatgggactaaaacttttaaatccctatcacatcggatg 13
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 73.8 bits (37), Expect = 8e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 106 ggactaatttgcgagacgaatctaatgagcctaattaatccataattaacctatgtgatg 165
||||||||| ||||||| |||||| |||||||||||||||||| |||||| ||||| | |
Sbjct: 1 ggactaattcgcgagacaaatctattgagcctaattaatccatgattaacatatgtaacg 60
Query: 166 ttacagtaaacat 178
|||||| |||||
Sbjct: 61 ctacagttaacat 73
>49013_osa-miR445f:pmrd
Length = 305
Score = 71.9 bits (36), Expect = 3e-13
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 183 taattatagattaattaggcttaaaaaatttatctcgtgaattagcttttatttatgtaa 242
||||||| |||||||||||||||||||||| || || ||||||||| ||||||| ||
Sbjct: 147 taattatggattaattaggcttaaaaaattcgtcccgcagattagctttcatttatgaaa 88
Query: 243 tt-gttttgtaagtagtctatatttaatactctaaattag 281
|| ||||| | | |||||||| |||||||||| |||||||
Sbjct: 87 ttagtttttttattagtctatgtttaatactccaaattag 48
Score = 52.0 bits (26), Expect = 3e-07
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 66 tattaaacgtagactattaataaaacccatcc-ataatcttggactaatttgcgagacga 124
|||||||| || |||| | |||||||| || | |||| |||||||||||| |||||||||
Sbjct: 248 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 189
Query: 125 atctaatgagcctaatta 142
|||| |||| |||||||
Sbjct: 188 atcttttgagtctaatta 171
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 245 gttttgtaagtagtctatatttaatactctaaattagtgtctaaa 289
||||| ||| |||| ||| ||||||||||||||||||||| ||||
Sbjct: 223 gttttataattagtgtatgtttaatactctaaattagtgtataaa 267
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 133 agcctaattaatccataatta 153
|||||||||||||||||||||
Sbjct: 127 agcctaattaatccataatta 147
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 2e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 170 agtaaacattctctaattatagattaattaggcttaaaaaatt 212
|||||||||| ||||| || |||||||||||||||| |||||
Sbjct: 74 agtaaacatttgctaatgatggattaattaggcttaataaatt 116
Score = 44.1 bits (22), Expect = 7e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 116 gcgagacgaatctaatgagcctaattaatccataatta 153
||||||||||| || | |||||||||||||||| ||||
Sbjct: 124 gcgagacgaatttattaagcctaattaatccatcatta 87
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 116 gcgagacgaatctaatgagcctaattaatcc 146
||||||||||||| ||||||||||||||||
Sbjct: 8 gcgagacgaatcttttgagcctaattaatcc 38
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 116 gcgagacgaatctaatgagcctaattaatcc 146
||||||||||||| ||||||||||||||||
Sbjct: 117 gcgagacgaatcttttgagcctaattaatcc 87
>49004_osa-miR442:pmrd
Length = 233
Score = 46.1 bits (23), Expect = 2e-05
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 158 atgtgatgttacagtaaacattctctaattatagattaattaggcttaaaaaatt 212
||||| || ||||||||||||| ||||| | |||||||||||||||| |||||
Sbjct: 107 atgtggtgctacagtaaacatttgctaatgacggattaattaggcttaataaatt 161
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 7e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 116 gcgagacgaatctaatgagcctaattaatccataatta 153
||||||||||||| ||||| |||||||||||| ||||
Sbjct: 113 gcgagacgaatcttttgagcataattaatccatcatta 76
>49058_osa-miR813:pmrd
Length = 203
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 113 tttgcgagacgaatctaatgag 134
||||||||||||||||||||||
Sbjct: 157 tttgcgagacgaatctaatgag 136
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 116 gcgagacgaatctaatgagcctaattaatccataattaacc 156
||||||||||||| |||||||||||| || || |||||||
Sbjct: 69 gcgagacgaatcttttgagcctaattagtctatgattaacc 29
