miRNEST 2.0, an integrative microRNA resource :: BLAST
>49838_osa-miRf10623-akr:pmrd
Length = 141
Score = 113 bits (57), Expect = 1e-25
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 113 cgctaaacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcgga 172
|||| |||||||||||||||| || ||||||| ||| |||| ||||| ||||| |||
Sbjct: 137 cgctgaacttagacacctcagcgccacgtcaactggaattgaatgtcgtgccaccgtgga 78
Query: 173 cgagagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtg 232
| ||| ||||||||||| ||||| ||| |||||||| ||| |||||||||| |||||||
Sbjct: 77 tgggagtctgagtcggcgcgccaatgtgtattcagcgccgtgctatttggcgctgaggtg 18
Query: 233 tctaatttcagcgccat 249
|||||||||||||||||
Sbjct: 17 tctaatttcagcgccat 1
Score = 44.1 bits (22), Expect = 7e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 220 tggcgttgaggtgtctaatttcagcgccat 249
||||| |||||||||||| |||||||||||
Sbjct: 112 tggcgctgaggtgtctaagttcagcgccat 141
>50595_osa-miRf11380-akr:pmrd
Length = 115
Score = 109 bits (55), Expect = 2e-24
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 122 tagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagact 181
|||||||||||| || ||||||| |||||| ||| ||| ||||||||| | ||||||
Sbjct: 1 tagacacctcagcgccacgtcaactggcgctaaatgctgtgccaccgcggatgggagact 60
Query: 182 gagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtcta 236
|||||||||||||||||||||||||||| | | |||||||||| |||||||||||
Sbjct: 61 gagtcggcgtgccaacgtgcattcagcgccatgctatttggcgctgaggtgtcta 115
>49839_osa-miRf10624-akr:pmrd
Length = 137
Score = 109 bits (55), Expect = 2e-24
Identities = 115/135 (85%)
Strand = Plus / Minus
Query: 113 cgctaaacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcgga 172
|||| |||||||||||||||| || ||||||| ||| |||| ||||| ||||| |||
Sbjct: 135 cgctgaacttagacacctcagcgccacgtcaactggaattgaatgtcgtgccaccgtgga 76
Query: 173 cgagagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtg 232
| ||| ||||||||||| ||||| ||| |||||||| ||| |||||||||| |||||||
Sbjct: 75 tgggagtctgagtcggcgcgccaatgtgtattcagcgccgtgctatttggcgctgaggtg 16
Query: 233 tctaatttcagcgcc 247
|||||||||||||||
Sbjct: 15 tctaatttcagcgcc 1
>49840_osa-miRf10625-akr:pmrd
Length = 135
Score = 107 bits (54), Expect = 6e-24
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 113 cgctaaacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcgga 172
|||| |||||||||||||||| || ||||||| ||| |||| ||||| ||||| |||
Sbjct: 2 cgctgaacttagacacctcagcgccacgtcaactggaattgaatgtcgtgccaccgtgga 61
Query: 173 cgagagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtg 232
| ||| ||||||||||| ||||| ||| |||||||| ||| |||||||||| |||||||
Sbjct: 62 tgggagtctgagtcggcgcgccaatgtgtattcagcgccgtgctatttggcgctgaggtg 121
Query: 233 tctaatttcagcgc 246
||||||||||||||
Sbjct: 122 tctaatttcagcgc 135
>49933_osa-miRf10718-akr:pmrd
Length = 135
Score = 97.6 bits (49), Expect = 6e-21
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 118 aacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgaga 177
||||||||||||| || || ||||||| ||||| |||| |||| |||| ||| ||||
Sbjct: 7 aacttagacaccttagcgccacgtcaactggcgttgaatgccgtgccaccatggatgaga 66
Query: 178 gactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtctaa 237
| ||||||||||||||||| || |||||||| ||| |||||||||| ||||||||||||
Sbjct: 67 ggctgagtcggcgtgccaatgtacattcagcaccgtgctatttggcgctgaggtgtctaa 126
Query: 238 tttcagcgc 246
||||||||
Sbjct: 127 gttcagcgc 135
>49593_osa-miRf10378-akr:pmrd
Length = 149
Score = 97.6 bits (49), Expect = 6e-21
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 105 tcgtatgtcgctaaacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtc 164
||||||| |||| || || |||||||||| || ||||||| ||||| |||| |||| |
Sbjct: 1 tcgtatgacgctgaaatttgacacctcagcgccacgtcaactggcgttgaatgccgtgcc 60
Query: 165 accgcggacgagagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcg 224
|| ||||| ||| |||| ||||||||||||||||||||||||| || |||||| |||
Sbjct: 61 actgcggataggaggctgattcggcgtgccaacgtgcattcagcgctgtgctatttagcg 120
Query: 225 ttgaggtgtctaatttcagcgccatacga 253
| ||||||||||| |||||||| ||||||
Sbjct: 121 tcgaggtgtctaagttcagcgctatacga 149
>50085_osa-miRf10870-akr:pmrd
Length = 163
Score = 89.7 bits (45), Expect = 1e-18
Identities = 120/145 (82%)
Strand = Plus / Plus
Query: 113 cgctaaacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcgga 172
|||| |||||||||||||||||| ||||||| |||||| ||||| |||| ||||| |||
Sbjct: 16 cgctgaacttagacacctcagtgtcacgtcaactggcgctgaataccgtgccaccgtgga 75
Query: 173 cgagagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtg 232
| ||| || |||| ||||||||||| |||||| | | | |||||| ||| |||||||
Sbjct: 76 tgggaggctaagtcagcgtgccaacgcacattcaacaccatgctatttagcgctgaggtg 135
Query: 233 tctaatttcagcgccatacgatttg 257
||||| || ||||||| ||||||||
Sbjct: 136 tctaagtttagcgccacacgatttg 160
Score = 52.0 bits (26), Expect = 3e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 101 caaatcgtatgtcgctaaacttagacacctcagtgcta 138
|||||||| || ||||||||||||||||||||| ||||
Sbjct: 160 caaatcgtgtggcgctaaacttagacacctcagcgcta 123
>51059_osa-miRf11844-akr:pmrd
Length = 115
Score = 77.8 bits (39), Expect = 5e-15
Identities = 96/115 (83%)
Strand = Plus / Plus
Query: 122 tagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagact 181
|||||||||||| || |||||| |||||| |||| |||| ||||| ||| | || ||
Sbjct: 1 tagacacctcagcgccacgtcacctggcgctgaatgccgtgccaccgtggatggaaggct 60
Query: 182 gagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtcta 236
||||| |||||||||||| ||||||||| | | |||||||||| |||||||||||
Sbjct: 61 gagtcagcgtgccaacgtacattcagcgccatgctatttggcgctgaggtgtcta 115
>49311_osa-miRf10096-akr:pmrd
Length = 131
Score = 77.8 bits (39), Expect = 5e-15
Identities = 106/127 (83%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 121 ttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagac 180
||||||||||||| || ||||||| ||| || |||| |||||||| |||||| |||| |
Sbjct: 121 ttagacacctcagcgccacgtcaactggtgctgaatgtcgtgtcatcgcggatgagaagc 62
Query: 181 tgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtctaattt 240
|||||||||||||||| | |||||| || |||||||||| |||||||||||| ||
Sbjct: 61 tgagtcggcgtgccaatg-----tcagcgccg-gctatttggcgctgaggtgtctaagtt 8
Query: 241 cagcgcc 247
|||||||
Sbjct: 7 cagcgcc 1
>49310_osa-miRf10095-akr:pmrd
Length = 131
Score = 77.8 bits (39), Expect = 5e-15
Identities = 106/127 (83%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 121 ttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagac 180
||||||||||||| || ||||||| ||| || |||| |||||||| |||||| |||| |
Sbjct: 121 ttagacacctcagcgccacgtcaactggtgctgaatgtcgtgtcatcgcggatgagaagc 62
Query: 181 tgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtctaattt 240
|||||||||||||||| | |||||| || |||||||||| |||||||||||| ||
Sbjct: 61 tgagtcggcgtgccaatg-----tcagcgccg-gctatttggcgctgaggtgtctaagtt 8
Query: 241 cagcgcc 247
|||||||
Sbjct: 7 cagcgcc 1
>49663_osa-miRf10448-akr:pmrd
Length = 159
Score = 75.8 bits (38), Expect = 2e-14
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 176 gagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtct 235
|||||| |||| |||||||||||| ||||||||||| | ||||| ||| |||||| |||
Sbjct: 83 gagactaagtcagcgtgccaacgtacattcagcgtcatgttatttagcgctgaggtatct 24
Query: 236 aatttcagcgccatacgatttg 257
|| |||||||||| ||||||||
Sbjct: 23 aagttcagcgccacacgatttg 2
>50676_osa-miRf11461-akr:pmrd
Length = 109
Score = 73.8 bits (37), Expect = 8e-14
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 125 acacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagactgag 184
||||||||| || ||||||| ||| || |||| |||| ||||||||| | ||| ||||
Sbjct: 1 acacctcagcgccacgtcaactggtgctgaatgccgtgccaccgcggatgggaggttgag 60
Query: 185 tcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgt 233
|||||||||||||||||||| |||| | | ||||||||| ||||||||
Sbjct: 61 tcggcgtgccaacgtgcatttagcgccatgctatttggctctgaggtgt 109
>50564_osa-miRf11349-akr:pmrd
Length = 139
Score = 63.9 bits (32), Expect = 8e-11
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 96 agcgtcaaatcgtatgtcgctaaacttagacacctcagtgctacgtcaattggcgcagaa 155
|||| |||||||| || || | || ||||||||||||| | ||||||| || ||| |||
Sbjct: 5 agcgccaaatcgtgtggcgttgaatttagacacctcagcgtcacgtcaactgtcgctgaa 64
Query: 156 tatcgtgtcaccgcggacgagagactgagtcggcgtgccaacgtgcattcagcgtcgttc 215
| |||| ||||||||| | ||| || |||| |||||||||| | ||||||||| ||| |
Sbjct: 65 tgccgtgccaccgcggatgggaggctaagtcagcgtgccaacatacattcagcgccgtgc 124
Query: 216 tatttggc 223
||||||||
Sbjct: 125 tatttggc 132
Score = 48.1 bits (24), Expect = 5e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 226 tgaggtgtctaatttcagcgccatacgatttgacgctgaa 265
|||||||||||| |||| ||||| |||||||| |||||||
Sbjct: 41 tgaggtgtctaaattcaacgccacacgatttggcgctgaa 2
>50367_osa-miRf11152-akr:pmrd
Length = 116
Score = 63.9 bits (32), Expect = 8e-11
Identities = 96/116 (82%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 122 tagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagact 181
|||||||||||| || |||||| |||||| |||| |||| ||| ||||| | ||||||
Sbjct: 1 tagacacctcagcgccacgtcatctggcgctgaatgccgtgccacggcggatgggagact 60
Query: 182 ga-gtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtcta 236
| ||| |||||||||||| |||||||| | | |||||||||| |||||||||||
Sbjct: 61 aaagtcagcgtgccaacgtacattcagcaccatgctatttggcgctgaggtgtcta 116
>50557_osa-miRf11342-akr:pmrd
Length = 115
Score = 61.9 bits (31), Expect = 3e-10
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 122 tagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagact 181
|||||| ||||| || ||||||| |||||| |||| |||| ||| |||| | ||||||
Sbjct: 1 tagacatctcagcgccacgtcaactggcgctgaatgccgtgccacgacggatgggagact 60
Query: 182 gagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtcta 236
||| |||||||||||| ||||||||| | | |||||||||| |||||| ||||
Sbjct: 61 atgtcagcgtgccaacgtacattcagcgccatgctatttggcgctgaggtatcta 115
>50094_osa-miRf10879-akr:pmrd
Length = 115
Score = 54.0 bits (27), Expect = 8e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 190 gtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtcta 236
|||||||||| ||||||||| | | |||||||||| |||||||||||
Sbjct: 69 gtgccaacgtacattcagcgccatgctatttggcgctgaggtgtcta 115
>49822_osa-miRf10607-akr:pmrd
Length = 137
Score = 54.0 bits (27), Expect = 8e-08
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 121 ttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagac 180
||||||||||||| || | ||||| |||||| |||| ||| ||||| ||| | |||||
Sbjct: 127 ttagacacctcagcgccatgtcaactggcgctgaatgccgtaccaccgtggatgggagac 68
Query: 181 tgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtctaattt 240
| |||| |||| ||||||| ||| || | | |||||||||| |||||||||||| ||
Sbjct: 67 taagtcagcgtaccaacgtatatttagtgccacgctatttggcgctgaggtgtctaagtt 8
Query: 241 cagcgcc 247
|||||||
Sbjct: 7 cagcgcc 1
>49258_osa-miRf10043-akr:pmrd
Length = 115
Score = 54.0 bits (27), Expect = 8e-08
Identities = 93/115 (80%)
Strand = Plus / Plus
Query: 122 tagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagact 181
|||||||||||| || ||||| | |||||| |||| ||||| ||| |||||| ||| ||
Sbjct: 1 tagacacctcagcgccacgtcgactggcgctgaatgtcgtgccactgcggacaggaggct 60
Query: 182 gagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgtcta 236
|||| | |||||||| ||||||||| | |||||||||| |||||||||||
Sbjct: 61 aagtcaacatgccaacgaacattcagcgccacgctatttggcgctgaggtgtcta 115
>51258_osa-miRf12043-akr:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 1e-06
Identities = 88/109 (80%)
Strand = Plus / Plus
Query: 125 acacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcggacgagagactgag 184
||||||||| || ||||||| |||||| |||| | | ||||||||| | ||| || ||
Sbjct: 1 acacctcagcgccacgtcaactggcgctgaatgctgagccaccgcggatgggaggctaag 60
Query: 185 tcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtgt 233
|| |||||||||||| ||||||| | | |||||||||| ||||||||
Sbjct: 61 tcagcgtgccaacgtacattcagtgccacgctatttggcgctgaggtgt 109
>50651_osa-miRf11436-akr:pmrd
Length = 155
Score = 48.1 bits (24), Expect = 5e-06
Identities = 108/136 (79%)
Strand = Plus / Plus
Query: 113 cgctaaacttagacacctcagtgctacgtcaattggcgcagaatatcgtgtcaccgcgga 172
|||| ||| ||||||| ||| || |||||||||| ||| |||| |||| ||| ||||
Sbjct: 12 cgctgaacatagacacttcaacgccacgtcaattgacgctgaatgccgtgctaccacgga 71
Query: 173 cgagagactgagtcggcgtgccaacgtgcattcagcgtcgttctatttggcgttgaggtg 232
|| || || |||| ||||||||| | |||| |||| | | |||||| | |||||||||
Sbjct: 72 tgaaaggctaagtcagcgtgccaatgaacatttagcgccatactatttagtgttgaggtg 131
Query: 233 tctaatttcagcgcca 248
||||| ||||||||||
Sbjct: 132 tctaaattcagcgcca 147
>50928_osa-miRf11713-akr:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 7e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 215 ctatttggcgttgaggtgtctaatttcagc 244
|||||||||| |||||||||||| ||||||
Sbjct: 30 ctatttggcgctgaggtgtctaaattcagc 1
