miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50890_osa-miRf11675-akr:pmrd
Length = 68
Score = 75.8 bits (38), Expect = 8e-15
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 36 atgcagttgagtcactggcatatgggtcccactttactatggcctacatgtcagtgactc 95
||||||||||||||||| || ||||||| ||||| |||||||| ||| |||||||||||
Sbjct: 68 atgcagttgagtcactgatatgtgggtcctactttgctatggcccacacgtcagtgactc 9
Query: 96 aactgc 101
||||||
Sbjct: 8 aactgc 3
>50359_osa-miRf11144-akr:pmrd
Length = 73
Score = 75.8 bits (38), Expect = 8e-15
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 34 acatgcagttgagtcactggcatatgggtcccactttactatggcctacatgtcagtgac 93
||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||||||| |
Sbjct: 73 acatgcatttgagtcactgacatgtgggtcccacttttctatggcccgcatgtcagtggc 14
Query: 94 tcaact 99
||||||
Sbjct: 13 tcaact 8
>49938_osa-miRf10723-akr:pmrd
Length = 70
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 36 atgcagttgagtcactggcatatgggtcccacttt 70
||||||||||| ||||| ||| |||||||||||||
Sbjct: 70 atgcagttgagccactgacatgtgggtcccacttt 36
>49939_osa-miRf10724-akr:pmrd
Length = 68
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 37 tgcagttgagtcactggcatatgggtcccacttt 70
|||||||||| ||||| ||| |||||||||||||
Sbjct: 1 tgcagttgagccactgacatgtgggtcccacttt 34
